enormandeau
Responsable / Manater, Plateforme de Bio-informatique de l'IBIS
IBIS (Institut de Biologie Intégrative et des Systèmes) | RAQ (Ressources Aquatiques Québec)Québec
Pinned Repositories
barque
Environmental DNA metabarcoding taxonomic identification
gawn
Genome Annotation Without Nightmares
go_enrichment
Transcripts annotation and GO enrichment Fisher tests
mapcomp
Genetic Map Comparison
meditation-timer
Simple meditation timer for Linux in Python
ncbi_blast_tutorial
Short introduction to command line NCBI blast tools
Scripts
Collection of various scripts
snplift
Convert genetic variant coordinates across genome assemblies
stacks_workflow
RADseq workflow built around STACKS
wgs_sample_preparation
Trim, Align to genome, Deduplicate, Realign WGS sequencing samples
enormandeau's Repositories
enormandeau/Scripts
Collection of various scripts
enormandeau/stacks_workflow
RADseq workflow built around STACKS
enormandeau/gawn
Genome Annotation Without Nightmares
enormandeau/barque
Environmental DNA metabarcoding taxonomic identification
enormandeau/go_enrichment
Transcripts annotation and GO enrichment Fisher tests
enormandeau/snplift
Convert genetic variant coordinates across genome assemblies
enormandeau/meditation-timer
Simple meditation timer for Linux in Python
enormandeau/mapcomp
Genetic Map Comparison
enormandeau/wgs_sample_preparation
Trim, Align to genome, Deduplicate, Realign WGS sequencing samples
enormandeau/github_tutorial
Introduction to Git and GitHub
enormandeau/python_exercises
A set of Python3 exercises to develop solid scripting foundations
enormandeau/club_bioinfo_ibis
Club de Programmation de l'IBIS
enormandeau/coelopa_fastsim
Coelopa inversion selection simulation in Rust
enormandeau/introR_2020
Formation à distance d'introduction à R - Édition 2020
enormandeau/angsd_pipeline
enormandeau/bwa-meth_pipeline
WGBS pipeline using bwa-meth and MethylDackel
enormandeau/headcopy
Improve cw (morse code) head copying speed
enormandeau/advent_of_code_2022
Python solutions to Advent of Code 2022
enormandeau/barque_test_dataset
Small eDNA metabarcoding dataset to test the [Barque pipeline](https://github.com/enormandeau/barque)
enormandeau/guideseq_ibis
Guide-seq analysis pipeline
enormandeau/guideseq_ibis_test_dataset
Test dataset for GUIDE-seq IBIS
enormandeau/ibis_server_commands
Helpful commands to play with SLURM on manitou, superdome, valeria...
enormandeau/intro_python_2020
Introduction en ligne à Python créée pour le RAQ
enormandeau/lost
enormandeau/mreps_workflow
Extract interesting microsatellite markers using mreps and format them into a usable .tsv format
enormandeau/pilon_workflow
Simple pilon workflow to save time
enormandeau/planets
Planets of the Solar System
enormandeau/qmk_firmware
Open-source keyboard firmware for Atmel AVR and Arm USB families
enormandeau/snplift_test_dataset
Test dataset for SNPLift
enormandeau/wgbs_workflow
Pipeline for WGBS analysis with multifactorial experimental designs