Pinned Repositories
cbpp_info
Information for starting in the Copenhagen Bioscience PhD Program
fastbook
The fastai book, published as Jupyter Notebooks
gcp_ml_engine_talk
Introduction to Data Science Processes and how to do this with Google Cloud ML-Engine
jupytext_tutorial
Tutorial on jupytext, VSCode, Jupyter and related stack (interactive)
nbconvert_md_processing
Postprocessing of markdown files resulting from jupyter nbconvert to be uploaded to github (gists).
rasa_chatbot_german_example
Tutorial eines ersten Chatbots aus RASA NLU und CORE, der einen Fahrraddiebstahl bearbeitet.
search_enamine_real_db
Search for similar molecules in syntetic molecule database of enamine with roughly 700 Mio. compounds.
snakemake-tutorial
VS Code on Binder
ALD-study
ALD study data analysis
representative-spectra-benchmark
Analysis of different consensus spectrum construction methods
enryH's Repositories
enryH/jupytext_tutorial
Tutorial on jupytext, VSCode, Jupyter and related stack (interactive)
enryH/fastbook
The fastai book, published as Jupyter Notebooks
enryH/nbconvert_md_processing
Postprocessing of markdown files resulting from jupyter nbconvert to be uploaded to github (gists).
enryH/rasa_chatbot_german_example
Tutorial eines ersten Chatbots aus RASA NLU und CORE, der einen Fahrraddiebstahl bearbeitet.
enryH/snakemake-tutorial-data
Official Snakemake tutorial run on binder.
enryH/alphapept
A modular, python-based framework for mass spectrometry. Powered by nbdev.
enryH/snakemake-tutorial
VS Code on Binder
enryH/adventofcode2022
enryH/ALD-study
ALD study data analysis
enryH/bert-enhancer
A Transformer Architecture Based on BERT and 2D Convolutional Neural Network to Identify DNA Enhancers from Sequence Information
enryH/BINN
Generating biologically informed neural networks
enryH/enryh
My profile.
enryH/example-hydra-app
An example Hydra app 🧪
enryH/git-tutorial-joana
enryH/git_training_work_2024
enryH/intro_dgm
"Deep Generative Modeling": Introductory Examples
enryH/list_your_publications
Query your list of publications using ORCID and DOI APIs
enryH/mrmr
mRMR (minimum-Redundancy-Maximum-Relevance) for automatic feature selection at scale.
enryH/multiprocessing_bayes_MOVE
MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
enryH/notes_template
Notes template build on Sphinx, Myst parser and a template
enryH/notes_template_recording
Example static website for recording on how to use the notes template
enryH/papermill
📚 Parameterize, execute, and analyze notebooks
enryH/pbs-torque
enryH/ProteusAI
ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure prediction, prediction of mutational effects to protein ligand interactions powered by artificial intelligence.
enryH/publishing-python-packages
Examples and exercises for Publishing Python Packages from Manning Books 🐍 📦 ⬆️
enryH/Python-Tsunami-Part1
enryH/quantms.io
The proteomics quantification format, extending mzTab for large scale datasets.
enryH/r4ds
R for data science: a book
enryH/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
enryH/VAETutorial
VAE example where images are modeled using 2 input dimensions