Pinned Repositories
autoQC_jython
Automating quality control for CAMDU microscopes.
carnavalmanager
protótipo pro carnaval manager
docker-from-omero-poc
proof-of-concept running docker container from omero web
erickmartins.github.io
Personal page using GH pages
omero_autoimport
Python scripts that we use for automatically importing data into OMERO.
training
repo for training materials
omero-cli-transfer
An OMERO CLI plugin for creating transfer packets between OMERO servers.
ezomero
A module with convenience functions for writing Python code that interacts with OMERO.
jax-omeroutils
A module and scripts for working with OMERO
omero-training-materials
Repo with materials for OMERO training and scripts to set up a training server.
erickmartins's Repositories
erickmartins/omero_autoimport
Python scripts that we use for automatically importing data into OMERO.
erickmartins/training
repo for training materials
erickmartins/docker-from-omero-poc
proof-of-concept running docker container from omero web
erickmartins/auto_qc
erickmartins/erickmartins.github.io
Personal page using GH pages
erickmartins/quarto-website-with-blog
Template repo for a Quarto website with a blog!
erickmartins/2024-advent-of-code
Trying the 2024 AoC in Rust.
erickmartins/autoQC_extras
Extra utilities (e.g. plotting) for data generated by autoQC.
erickmartins/bestpractices_workshop
Draft repo for the "best practices" workshop
erickmartins/CostedBookings
erickmartins/docker-example-omero
OMERO Docker compose example
erickmartins/erickmartins
erickmartins/erickratamero-blog
erickmartins/example_flask_plotly
erickmartins/ezomero
A module with convenience functions for writing Python code that interacts with OMERO.
erickmartins/flask-oauth-example
Example code from my "OAuth Authentication with Flask" article.
erickmartins/i2k_ezomero
material for the "OMERO for developers" workshop.
erickmartins/image-processing
Image Processing with Python
erickmartins/iwazaru_bot
erickmartins/L0Smoothing
L0 Gradient Minimisation smoothing plugin for Fiji
erickmartins/list-of-update-sites
The update sites ImageJ knows about automatically
erickmartins/moped_python
a model of dynamics in competitive cycling pelotons. now in Python.
erickmartins/omero-cli-transfer
An OMERO CLI plugin for creating transfer packets between OMERO servers.
erickmartins/omero-gallery
erickmartins/omero_for_developers
material for the "OMERO for developers" workshop.
erickmartins/pyalfe
erickmartins/quarto-tutorial
erickmartins/scipy_proceedings
Tools used to generate the SciPy conference proceedings
erickmartins/talks
Assorted talks and slides
erickmartins/zarr-fun
Repo with zarr snippets while I learn how to do things with it