TheJacksonLaboratory/ezomero

Issues

• [BUG] Pages outdated

  #117 opened a month ago by TorecLuik
  3

• [BUG] ZARR upload not working

  #109 opened 4 months ago by jo-mueller
  15

• [FEATURE] Clarify in README that install requires zeroc-ice

  #110 opened 4 months ago by psobolewskiPhD
  1

• [BUG] Coverage badge not working with SSO for repo

  #106 opened 5 months ago by erickmartins
  2

• [BUG] Ezomero 3.0.0 - ModuleNotFoundError: No module named 'pwd'

  #105 opened 7 months ago by rmassei
  2

• [FEATURE] Better version pinning

  #103 opened 7 months ago by erickmartins
  0

• [BUG] ezomero for importing error by using omero-user-token for omero connection

  #100 opened 8 months ago by tymiao1220
  21

• ezimport doesn't support OME-NGFF

  #97 opened 8 months ago by will-moore
  1

• Consider using the stdout from importer to get Image IDs

  #98 opened 10 months ago by will-moore
  3

• [FEATURE] Create orphaned `FileAnnotations`

  #89 opened 10 months ago by erickmartins
  1

• [BUG] post_roi() for polygon and polyline not working

  #90 opened a year ago by n-loureiro
  13

• [BUG] cleaning up datasets in case of security violation in `post_dataset`

  #86 opened a year ago by erickmartins
  0

• [FEATURE] Add DOI

  #66 opened a year ago by erickmartins
  5

• Upper-bound numpy to <2.0

  #83 opened a year ago by erickmartins
  1

• [FEATURE] post_table by columns

  #80 opened a year ago by juliomateoslangerak
  1

• [FEATURE] Add description to ezimport

  #74 opened a year ago by abhamacher
  3

• [FEATURE] Getting Comment annotations

  #77 opened a year ago by raymond301
  4

• using ezomero test infrastructure

  #81 opened a year ago by juliomateoslangerak
  2

• [BUG] Documentation errors due to how sphinx wants to handle dataclasses

  #68 opened a year ago by mellertd
  1

• [FEATURE] Implement `fill_color`, `stroke_color` and `stroke_width` as `Shape` parameters

  #65 opened a year ago by erickmartins
  1

• omero-py version

  #75 opened 2 years ago by will-moore
  2

• Specifying range in get_image

  #4 opened 2 years ago by juliomateoslangerak
  1

• [BUG] Github actions failing on code coverage step

  #47 opened 2 years ago by mellertd
  2

• [FEATURE] Verbose option for ezomero.connect

  #67 opened 2 years ago by mellertd
  0

• [BUG] unexpected indentation on line 480 of _gets.py

  #62 opened 2 years ago by mellertd
  1

• [BUG] TypeError for Shapes with no FillColor

  #63 opened 2 years ago by JensWendt
  4

• Adding a post_table

  #16 opened 2 years ago by juliomateoslangerak
  4

• [FEATURE] add cross-group functionality to `post_table`

  #59 opened 2 years ago by erickmartins
  0

• [BUG] `ezimport` cannot move/annotate imports on certain `clientPath`s

  #55 opened 2 years ago by erickmartins
  2

• Fix docstring for `ezomero.ezimport`

  #53 opened 2 years ago by erickmartins
  1

• [BUG] Image orientation change upon upload due to transpose

  #54 opened 2 years ago by BlanchardMR
  6

• [FEATURE] Add optional `group` argument to `post_dataset` and `post_image`

  #48 opened 3 years ago by erickmartins
  2

• [FEATURE] post_image reorder axis

  #29 opened 3 years ago by romainGuiet
  2

• [FEATURE] JSON API functionality

  #31 opened 3 years ago by erickmartins
  0

• [FEATURE] Add ability to handle pyramid levels

  #35 opened 3 years ago by mellertd
  0

• Tests needed for linking functions

  #39 opened 3 years ago by mellertd
  1

• [FEATURE] Improved error messages

  #38 opened 3 years ago by mellertd
  1

• [FEATURE] get_roi_ids, get_shape_ids, and get_shape

  #40 opened 3 years ago by mellertd
  0

• [FEATURE] post_screen and link_plates_to_screen

  #36 opened 3 years ago by erickmartins
  1

• Create a more full featured get_image_ids

  #2 opened 3 years ago by mellertd
  0

• [FEATURE] Getting Tag annotations

  #30 opened 3 years ago by romainGuiet
  3

• Document design principles

  #11 opened 3 years ago by mellertd
  5

• Split up `_ezomero.py`

  #22 opened 3 years ago by erickmartins
  1

• Creating file annotations / attachments

  #21 opened 3 years ago by abhamacher
  2

• across_groups flag being ignored

  #19 opened 4 years ago by mellertd
  2

• Handle non-existing/inaccessible objects

  #7 opened 4 years ago by erickmartins
  2

• Create html version of documentation

  #12 opened 4 years ago by mellertd
  1

• Extend all relevant functions to do cross-group queries

  #5 opened 4 years ago by erickmartins
  6

• Create an "ezconnect" function

  #3 opened 4 years ago by mellertd
  8