CRAN-required revisions during submission. From an email from Beni

[eriqande]

• #46
  Probably because linebreaks count as spaces too.
  Please remove unecassary ones.

• #47
  programming interface) names in single quotes in title and description.
  e.g: --> 'gscramble'
  Please note that package names are case sensitive.

• #48
  add these in the description field of your DESCRIPTION file in the form
  authors (year) doi:...
  authors (year) arXiv:...
  authors (year, ISBN:...)
  or if those are not available: https:...
  with no space after 'doi:', 'arXiv:', 'https:' and angle brackets for
  auto-linking. (If you want to add a title as well please put it in
  quotes: "Title")

• #49
  "F" as vector names.
  'T' and 'F' instead of TRUE and FALSE:
  man/create_GSP.Rd:
  create_GSP(
  pop1,
  pop2,
  F1 = F,
  F2 = F,
  F1B = F,
  F1B2 = F,
  AllowSinglePop = FALSE
  )

• #50
  the functions results in the documentation. Please write about the
  structure of the output (class) and also what the output means. (If a
  function does not return a value, please document that too, e.g.
  \value{No return value, called for side effects} or similar)
  Missing Rd-tags:
  drop_segs_down_gsp.Rd: \value
  mat_scramble.Rd: \value
  perm_gs_by_pops.Rd: \value
  rearrange_genos.Rd: \value
  recomb_point.Rd: \value
  renumber_GSP.Rd: \value
  seg2tib.Rd: \value

• #51
  (e.g. because of missing additional software, missing API keys, ...) by
  the user. That's why wrapping examples in \dontrun{} adds the comment
  ("# Not run:") as a warning for the user. Does not seem necessary.
  Please replace \dontrun with \donttest.
  Please unwrap the examples if they are executable in < 5 sec, or replace
  dontrun{} with \donttest{}.

• #52
  suppressed.
  It is more R like to generate objects that can be used to extract the
  information a user is interested in, and then print() that object.
  Instead of print() rather use message()/warning() or
  if(verbose)print(..) (or maybe stop()) if you really have to write text
  to the console. (except for print, summary, interactive functions)
  -> R/sim_level_founder_haplos.R

Please fix and resubmit.

Best,
Benjamin Altmann

[eriqande]

These updates passed all CRAN checks as before.