esteinig/vircov

Issues

• Split off the count in grouped reference selection

  #23 opened 2 years ago by esteinig
  0

• 0-value alignment output

  #22 opened 2 years ago by esteinig
  0

• Output column names

  #13 opened 2 years ago by colindaven
  7

• Continuous integration

  #6 opened 2 years ago by esteinig
  1

• Performance optimisation [PAF]

  #8 opened 2 years ago by esteinig
  10

• Reference sequence description in table output

  #12 opened 2 years ago by esteinig
  5

• SAM/BAM alignment support

  #3 opened 2 years ago by esteinig
  2

• Strobealign BAM --min-cov

  #16 opened 2 years ago by esteinig
  1

• Coverage conditional regions filter

  #15 opened 2 years ago by esteinig
  0

• Segmented genomes

  #17 opened 2 years ago by esteinig
  1

• Unit tests core components

  #5 opened 3 years ago by esteinig
  2

• Coverage terminal plot

  #2 opened 3 years ago by esteinig
  3

• Rename `--cov-reg` to `--regions`

  #10 opened 3 years ago by esteinig
  0

• Plots not filtered

  #9 opened 3 years ago by esteinig
  0

• Reporting threshold

  #7 opened 3 years ago by esteinig
  1

• Verbose output in table format

  #4 opened 3 years ago by esteinig
  1

• Enhanced output

  #1 opened 3 years ago by esteinig
  1