Pinned Repositories
cookbook
course
ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
ete_toolchain
etetoolkit_GSoC
ext_apps
A compilation of external software used by ETE
GSoC
OBF Google Summer of Code
pmodeltest
Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).
treematcher
Search flexible patterns within tree structures using regular expression like syntax.
webplugin
Experiments for a new webplugin module (examples for phylotastic.org project )
ETE Toolkit's Repositories
etetoolkit/ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
etetoolkit/cookbook
etetoolkit/course
etetoolkit/treematcher
Search flexible patterns within tree structures using regular expression like syntax.
etetoolkit/pmodeltest
Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).
etetoolkit/ext_apps
A compilation of external software used by ETE
etetoolkit/webplugin
Experiments for a new webplugin module (examples for phylotastic.org project )
etetoolkit/ete4_apps
command line applications based on ete4
etetoolkit/ete_toolchain
etetoolkit/etetoolkit_GSoC
etetoolkit/GSoC
OBF Google Summer of Code
etetoolkit/logicali
etetoolkit/ete-data
Data files to use with the ETE Toolkit