Pinned Repositories
deep-rules
Ten Quick Tips for Deep Learning in Biology
AntiBERTy
Antibody-specific masked language model
AttentionDeepMIL
Implementation of Attention-based Deep Multiple Instance Learning in PyTorch
DeepArk_manuscript
VanEmdeBoasTree
My implementation of the Van Emde Boas Tree in C++. The Van Emde Boas Tree is an interesting tree data structure with that can search, insert, and delete in log-logarithmic time. See https://en.wikipedia.org/wiki/Van_Emde_Boas_tree for more information.
DeepArk
Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning
selene
a framework for training sequence-level deep learning networks
deep-review
A collaboratively written review paper on deep learning, genomics, and precision medicine
tensorflow
An Open Source Machine Learning Framework for Everyone
AMBER
Automated Modelling for Biological Evidence-based Research
evancofer's Repositories
evancofer/VanEmdeBoasTree
My implementation of the Van Emde Boas Tree in C++. The Van Emde Boas Tree is an interesting tree data structure with that can search, insert, and delete in log-logarithmic time. See https://en.wikipedia.org/wiki/Van_Emde_Boas_tree for more information.
evancofer/DeepArk_manuscript
evancofer/AntiBERTy
Antibody-specific masked language model
evancofer/AttentionDeepMIL
Implementation of Attention-based Deep Multiple Instance Learning in PyTorch
evancofer/deep-review
A collaboratively written review paper on deep learning, genomics, and precision medicine
evancofer/deep-rules
Ten Quick Tips for Deep Learning in Biology
evancofer/GRFP_LaTeX_document_class
A LaTeX document class formatted according to the GRFP guidelines.
evancofer/review_sentiment_analysis
COS 424 at Princeton
evancofer/evancofer.github.io
My personal webpage.
evancofer/gcb535challenge
Forked from https://github.com/greenelab/gcb535challenge
evancofer/huge-academic-theme
evancofer/k-d-tree
My implementation of a k-d tree, an interesting k-dimensional partitioning tree data structure with linear time access in the worst case. See https://en.wikipedia.org/wiki/K-d_tree for more information.
evancofer/keras_examples
This repository contains examples/scripts for Keras.
evancofer/manubot-rootstock
Clone me to create your manuscript
evancofer/mazemaster
Text-based MUD game written in Scala using the akka toolkit.
evancofer/reddigest-scalafied
A rewrite and revamp of reddigest
evancofer/riboseq
Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.
evancofer/selene
a framework for training sequence-level deep learning networks
evancofer/tensorflow
Computation using data flow graphs for scalable machine learning