Pinned Repositories
bc_deep_learning_in_biology
ecoref
An Escherichia coli genetic reference panel
funscoR
R package for functionally scoring phosphorylation sites
int3dInterfaces
Pipeline to extract protein interfaces from Interactome3d structures
kpred
Uncovering phosphorylation–based specificities through functional interaction networks
ksea
Kinase Activity Predictions from shotgun proteomics
phosfate
Phosfate - Understanding human quantitative phosphoproteomics
ptm_hotspots
Estimate PTM hotspots in protein sequence alignments
ptmAge
Calculates the age of a PTM using ancestral reconstruction (from Romain Studer)
ptmdb
This projects contains all the necessary code to create and fill the ptmdb database. This repository can act as a submodule of other projects intended to use the ptmdb
evocellnet's Repositories
evocellnet/funscoR
R package for functionally scoring phosphorylation sites
evocellnet/ptm_hotspots
Estimate PTM hotspots in protein sequence alignments
evocellnet/ksea
Kinase Activity Predictions from shotgun proteomics
evocellnet/int3dInterfaces
Pipeline to extract protein interfaces from Interactome3d structures
evocellnet/bc_deep_learning_in_biology
evocellnet/kpred
Uncovering phosphorylation–based specificities through functional interaction networks
evocellnet/ptmAge
Calculates the age of a PTM using ancestral reconstruction (from Romain Studer)
evocellnet/phosfate
Phosfate - Understanding human quantitative phosphoproteomics
evocellnet/ptmdb
This projects contains all the necessary code to create and fill the ptmdb database. This repository can act as a submodule of other projects intended to use the ptmdb
evocellnet/bacteria2tfbs
Scripts and utilities to search TFBS in bacterial genomes
evocellnet/ecoref
An Escherichia coli genetic reference panel
evocellnet/kinase-activity-net
evocellnet/mutfunc-webserver
Bug tracker for the mutfunc webserver
evocellnet/evocellnet.github.io
evocellnet/sysbio_teaching
Repository for the ETHZ Systems Biology course (FS2023)