fabilab/cell_atlas_approximations

This is an umbrella repo describing cell atlas approximations

Cell Atlas Approximations

This is an umbrella repo describing statistical approximations of cell atlases.

The code is structured in separate repos:

There are two main research directions:

• Cell atlases of healthy organisms across species
• Single cell data from patients with diseases

The repos links for the healthy cell atlases are:

• Approximation (aka compression): https://github.com/fabilab/cell_atlas_approximations_compression
• API: https://github.com/fabilab/cell_atlas_approximations_API
• Natural Language Processing (NLP): https://github.com/fabilab/cell_atlas_approximations_NLP
• Human Interface: https://github.com/fabilab/cell_atlas_approximations_HI

The repos links for the disease cell atlases are:

• Disease approximation: https://github.com/fabilab/cell_atlas_approximations_disease_compression
• Disease API: https://github.com/fabilab/cell_atlas_approximations_disease_API