Pinned Repositories
NGS-pipeline
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
10x-scATAC-2019
Code Repository for Satpathy Granja et al 2019
5years
address
algorithm-catrapid_library
Create protein or transcript libraries
alphafold
sandbox for secondary structure modeling
APOBEC3B
BAGELR
R implementation of the BAGEL method to call for gene essentiality significance
basic
bioconductor_learn
faker1c's Repositories
faker1c/single-cell-best-practices
https://www.sc-best-practices.org
faker1c/sanbomics_scripts
scripts and notebooks from sanbomics
faker1c/single_cell_tutorial
单细胞分析的中文pipeline
faker1c/omicverse
A python library for multi omics included bulk and single cell RNA-seq analysis.
faker1c/single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
faker1c/Z3tt
🔗 Source code of my homepage build with {blogdown}, HUGO and Netlify
faker1c/comboFM
Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines or patient-derived cells.
faker1c/MGC-BioSB-SingleCellAnalysis2020
faker1c/sheng-xin-xiao-bai-yu
历史文档备份
faker1c/scell_lung_adenocarcinoma
This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
faker1c/methy_array
faker1c/hsm
Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
faker1c/hsm-web
Website associated with the "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
faker1c/MosaicForecast
A mosaic detecting software based on phasing and random forest
faker1c/GWA_tutorial
A comprehensive tutorial about GWAS and PRS
faker1c/getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
faker1c/survival
faker1c/GENTRL
Generative Tensorial Reinforcement Learning (GENTRL) model
faker1c/Dichotomous-of-innate-immune-landscape
Dichotomous of innate immune landscape
faker1c/mouse-xx-xy-C1
faker1c/TCGA_BRCA-1
faker1c/scRNA_10X
faker1c/pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
faker1c/address
faker1c/TCGA_CCLE_paper
faker1c/10x-scATAC-2019
Code Repository for Satpathy Granja et al 2019
faker1c/infercnv
Inferring CNV from Single-Cell RNA-Seq
faker1c/Note
faker1c/oneliners
Useful bash one-liners for bioinformatics.
faker1c/SCIMET