Pinned Repositories
10x-scATAC-2019
Code Repository for Satpathy Granja et al 2019
5years
address
algorithm-catrapid_library
Create protein or transcript libraries
alphafold
sandbox for secondary structure modeling
APOBEC3B
BAGELR
R implementation of the BAGEL method to call for gene essentiality significance
basic
bioconductor_learn
NGS-pipeline
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
faker1c's Repositories
faker1c/SCS_CAF
faker1c/Python
All Algorithms implemented in Python
faker1c/Python-100-Days
Python - 100天从新手到大师
faker1c/linux-command
Linux命令大全搜索工具,内容包含Linux命令手册、详解、学习、搜集。https://git.io/linux
faker1c/MiniFold
Creating a mini version of Deep Learning for Protein Structure Prediction inspired by DeepMind AlphaFold algorithm
faker1c/5years
faker1c/tcga_example
faker1c/GEO
faker1c/normalizeGeneCounts
Takes raw counts and normalize to CPM, RPKM or TPM
faker1c/scRNA_smart_seq2
faker1c/GSE76275-TNBC
faker1c/gtex_BRCA
faker1c/TCGA_AML
faker1c/my-R
a small collection for my R scripts
faker1c/R_bilibili
faker1c/TF_map
faker1c/DeepMind-alphafold-repl
https://moalquraishi.wordpress.com/2018/12/09/alphafold-casp13-what-just-happened/
faker1c/gwas_scripts
Codebook from my GWAS cookbook
faker1c/VCFpca
faker1c/crAssphage_project
Source code for the crAssphage project
faker1c/TCGA_BRCA
faker1c/biotrainee
faker1c/METABRIC
faker1c/NGS-pipeline
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
faker1c/IDmap
faker1c/alphafold
sandbox for secondary structure modeling
faker1c/labs
Rmd source files for the HarvardX series PH525x
faker1c/docker
faker1c/CRC_code
Bioinformatics analysis code.
faker1c/HNSCC_APOBEC
Analyses for our Oncogene manuscript here: https://www.nature.com/articles/s41388-018-0657-6. Analyses accessed in the markdown file here: https://github.com/Townsend-Lab-Yale/HNSCC_APOBEC/blob/master/APOBEC_HNSCC_manuscript_analysis.md