Pinned Repositories
Ace-Pyrotag-Pipeline
Ace Pyrotag Pipeline
AmpliCopyrighter
CopyRighter
Artemis
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
bio-phylo
Phyloinformatic analysis using Perl
file-sharednfslock
File::SharedNFSLock Perl module
heatmapper
Heatmapper - Make heatmaps of biological communities
io-pager
IO::Pager - Select a pager and pipe text to it if destination is a TTY
Math-Random-MT-Perl
Pure Perl version of the Math::Random::MT module to generate random numbers using the Mersenne-Twister algorithm
MetaVelvet
An extension of Velvet assembler to de novo metagenome assembly from short sequence reads
svg-tt-graph
Perl module for creating SVG graphs
fangly's Repositories
fangly/Math-Random-MT-Perl
Pure Perl version of the Math::Random::MT module to generate random numbers using the Mersenne-Twister algorithm
fangly/io-pager
IO::Pager - Select a pager and pipe text to it if destination is a TTY
fangly/AmpliCopyrighter
CopyRighter
fangly/bio-phylo
Phyloinformatic analysis using Perl
fangly/file-sharednfslock
File::SharedNFSLock Perl module
fangly/heatmapper
Heatmapper - Make heatmaps of biological communities
fangly/MetaVelvet
An extension of Velvet assembler to de novo metagenome assembly from short sequence reads
fangly/module-install-readmefrompod
(perl) A Module::Install extension to automatically convert POD to a README
fangly/OPP
Other People's Pipeline
fangly/pod-simple
Framework for Parsing and Formatting POD
fangly/styles
Repository of CSL citation styles.
fangly/covr
Test coverage reports for R
fangly/fastq-tools
Small utilities for working with fastq sequence files.
fangly/hitman
HIgh Throughput Microbial ANalysis
fangly/IPC-Run
Clone of http://svn.ali.as/cpan/trunk/IPC-Run
fangly/lintr
Static Code Analysis for R
fangly/math--gsl
Perl interface to the GNU Scientific Library
fangly/merge_gg_silva
Combine the goodness of the Greengenes and Silva microbial databases
fangly/minced
Mining CRISPRs in Environmental Datasets
fangly/module-install-podfromeuclid
Module::Install extension to make POD from Getopt::Euclid-based scripts
fangly/MPAndroidChart_moveViewToX
Testing moveViewToX()
fangly/nesoni
High throughput sequencing analysis tools
fangly/Osmand
osmand
fangly/phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
fangly/pod-simple-select
fangly/qiime
Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests
fangly/R-Box
R package for Sublime Text 3
fangly/seq_crumbs
Little sequence file utilities meant to work within Unix pipelines
fangly/tax2tree
Automated taxonomy decoration onto a tree
fangly/test-more
Test::More, Test::Simple and Test::Builder Perl modules for writing tests