felixlee0608

Bioinformatics

Pinned Repositories

BioTools
Bioinformatics tools
Language:HTML0 1 00
CNSfig
CNS figure code
Language:HTML0 1 01
cutandrun
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.
Language:Nextflow00
ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
Language:R363 15 1.1k127
pyCirclize
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
Language:Python661 9 4138
plotsr
Tool to plot synteny and structural rearrangements between genomes
Language:Python267 5 7627
signac
R toolkit for the analysis of single-cell chromatin data
Language:R302 6 1.2k84
r-argparse
command-line optional and positional argument parser
Language:R103 5 4911

felixlee0608's Repositories

felixlee0608/BioTools
Bioinformatics tools
Language:HTML0 1 00
felixlee0608/CNSfig
CNS figure code
Language:HTML0 1 01
felixlee0608/cutandrun
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.
Language:Nextflow00