pyft: Missing FIRE precision scores for MSPs in pyft.Ranges() class
Closed this issue · 2 comments
aman62000 commented
There is currently no way to access the precision scores when accessing fibers with pyft, requires the use of pysam 'aq' tag in order to get individual fiber FIRE precision value information.
pyft version 0.1.12
mrvollger commented
I have added the ability in a branch called footprint, which you can install with:
pip install -e 'git+https://github.com/fiberseq/fibertools-rs.git@footprint#egg=pyft&subdirectory=py-ft'
but I don't have time to test so please try it out and share with me if it is working.
mrvollger commented
the data will be in
fiber.msp.qual