flatironinstitute/CaImAn-MATLAB

Issues

• Problem with removing components using manually_refine_components.m

  #115 opened 2 years ago by ajmack-utah
  0

• Porblem with normcorre: Index in position 3 is invalid. Array indices must be positive integers or logical values.

  #114 opened 4 years ago by Mtkostecki
  0

• Variable mis-named?

  #113 opened 4 years ago by nobias
  0

• run_CNMF_patches indices compatibility

  #112 opened 4 years ago by hyewkim
  0

• ERROR:Unrecognized function or variable 'graph_conn_comp_mex'.

  #111 opened 4 years ago by albitcaban
  0

• Issue in run_pipeline line 127

  #110 opened 4 years ago by CharlieOC19
  0

• Seeded Initialization script

  #109 opened 4 years ago by eltabbal
  0

• Error with p value

  #108 opened 4 years ago by oregonGCAMP
  0

• Trouble using ROI_GUI

  #107 opened 4 years ago by CharlieOC19
  1

• Error in run_pipeline

  #106 opened 5 years ago by jic0101
  1

• Error in run_CNMF_patches (line 121) - [idx, value] = fetchNext(future_results);

  #105 opened 5 years ago by connorjohnson1
  2

• Implementation for neurofinder/spikefinder challenges

  #64 opened 7 years ago by alexklibisz
  2

• Undefined function or variable 'NoRMCorreSetParms'.

  #103 opened 5 years ago by tomatoccoo
  2

• Errors in demo

  #104 opened 5 years ago by saglag
  7

• How to estimate resting-state F0?

  #102 opened 5 years ago by wenxuanliang
  2

• Potential improvement on construct_patches.m

  #101 opened 5 years ago by wenxuanliang
  4

• Question regarding the hard-coded 65x65 search frame

  #100 opened 5 years ago by wenxuanliang
  1

• How to tune eta and beta for sparse_NMF_initialization.m

  #99 opened 5 years ago by wenxuanliang
  4

• Question on PSD Calculation

  #98 opened 5 years ago by wenxuanliang
  10

• Error using parallel.FevalFuture/fetchNext

  #95 opened 5 years ago by 674067482
  1

• DEMO_pipeline

  #91 opened 5 years ago by Mocambo90
  9

• Error using get_noise_fft (line 13) Too many output arguments.

  #97 opened 5 years ago by tochenan
  4

• run_pipeline error - Undefined function or variable 'NoRMCorreSetParms'.

  #96 opened 5 years ago by tochenan
  1

• error in demo_endoscope

  #94 opened 5 years ago by elizabethpereida
  1

• demo_endoscope

  #93 opened 5 years ago by zoranne
  1

• exp2 kernel error in cvx_foopsi

  #92 opened 5 years ago by jrclimer
  6

• F_dff time shifted compared to F_full?

  #89 opened 6 years ago by grego1979
  2

• Optimization of time constants when solving the AR2 Model

  #90 opened 6 years ago by ehennestad
  6

• Order of components obtained by "demo_patches.m" ?

  #82 opened 6 years ago by hubhubhang
  2

• detrend_df_f

  #88 opened 6 years ago by grego1979
  0

• Error run_pipeline.m -- sizY?

  #87 opened 6 years ago by akim5651
  2

• Processing many .tif files

  #86 opened 6 years ago by PhantomSpike
  1

• what's the difference between DF/F extracted by extract_DF_F.m and plot_components_GUI.m ?

  #85 opened 6 years ago by chunyueli
  7

• process multiple sessions using run_pipeline

  #83 opened 6 years ago by chunyueli
  4

• importKerasNetwork

  #84 opened 6 years ago by grego1979
  3

• run_pipeline error

  #79 opened 6 years ago by szocs93
  8

• Memory error using demo_patches

  #81 opened 6 years ago by hubhubhang
  3

• Tips on using demo_patch ?

  #80 opened 6 years ago by hubhubhang
  1

• Error message in using demo_patches.m - Unable to read HDF5 file 'cnn_model.h5'. The error message was: 'The filename specified was either not found on the MATLAB path or it contains unsupported characters.''

  #78 opened 6 years ago by hubhubhang
  11

• Error in CNM.fitPatches

  #77 opened 6 years ago by JSignoretGenest
  3

• paste centroids of neurons as a ROI_list

  #76 opened 6 years ago by LoOthar
  2

• ROI_GUI.m requires 8 varargin, but gets only 6 in pipeline.m

  #75 opened 7 years ago by pgoltstein
  9

• Reference to non-existing field in new ROI_GUI.m code

  #72 opened 7 years ago by HagaiHargil
  21

• Error in register_ROI.m

  #67 opened 7 years ago by masa6161
  9

• Error When running pipeline script

  #63 opened 7 years ago by vd2309
  5

• estimated spikes not returned by run_CNMF_patches

  #62 opened 7 years ago by jennan
  1

• Finding relevant coordinates from Coor variable for each file

  #60 opened 7 years ago by HagaiHargil
  2

• Errors while handling loaded workspace variables as input

  #59 opened 7 years ago by HagaiHargil
  3

• demo_3d.m throws error at update_spatial_components

  #55 opened 8 years ago by aandreev0
  3

• "N-dimensional indexing allowed for full matrices only."

  #54 opened 8 years ago by m0userat25
  2