flo-compbio/gopca

Issues

• get_xlmhg_stat() takes at most 4 arguments (6 given)

  #13 opened 7 years ago by hjistb
  2

• GO-PCA demo no longer works. Dead dropbox links

  #14 opened 6 years ago by ruxi
  0

• selected pca signature matrix

  #12 opened 7 years ago by every-man
  0

• extracting signatures and Plots

  #11 opened 8 years ago by ernestopicardi
  2

• Do not disable global filter completely when no ontology file is provided

  #1 opened 8 years ago by flo-compbio
  0

• Review global filtering rules

  #3 opened 8 years ago by flo-compbio
  0

• Silence warning from xlmhg during run

  #5 opened 8 years ago by flo-compbio
  0

• Erron in importing genometools

  #10 opened 8 years ago by ernestopicardi
  2

• Font size of axis labels in signature matrix is not set according to `font` parameter

  #9 opened 8 years ago by flo-compbio
  0

• PCA on domains frequencies?

  #8 opened 8 years ago by alephreish
  4

• AssertionError on isinstance(gene_set_db, GeneSetDB)

  #6 opened 8 years ago by alephreish
  3

• GOPCA.run() should take both an expression matrix and a set of genes

  #4 opened 8 years ago by flo-compbio
  1

• Add test cases for scripts (command-line interface)

  #7 opened 8 years ago by flo-compbio
  0

• Expand documentation on how to use `gopca_extract_go_gene_sets.py`

  #2 opened 9 years ago by flo-compbio
  0