Pinned Repositories
all_viral_seq_extraction
Extract all known viral sequences from NGS data
alona
analysis of single cell RNA sequencing data and cell type annotation
awesome-CRISPR
List of software/websites/databases/other stuff for genome engineering
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
biopython
Official git repository for Biopython (converted from CVS)
CasMINI-Miseq-analysis
CRISPR-PACMAN-pool-generation
CRISPR-screening
Processed for pooled sgRNA screening analysis.
crop-seq
Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)
CS-Notes
:books: 技术面试必备基础知识、Leetcode、计算机操作系统、计算机网络、系统设计、Java、Python、C++
frankzelph's Repositories
frankzelph/CRISPR-screening
Processed for pooled sgRNA screening analysis.
frankzelph/awesome-CRISPR
List of software/websites/databases/other stuff for genome engineering
frankzelph/all_viral_seq_extraction
Extract all known viral sequences from NGS data
frankzelph/alona
analysis of single cell RNA sequencing data and cell type annotation
frankzelph/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
frankzelph/biopython
Official git repository for Biopython (converted from CVS)
frankzelph/CasMINI-Miseq-analysis
frankzelph/CRISPR-PACMAN-pool-generation
frankzelph/crop-seq
Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)
frankzelph/CS-Notes
:books: 技术面试必备基础知识、Leetcode、计算机操作系统、计算机网络、系统设计、Java、Python、C++
frankzelph/data-science
test
frankzelph/DeepCas13
frankzelph/deltaSVM
Codes to run deltaSVM models to predict allelic TF binding
frankzelph/fermi-lite
Standalone C library for assembling Illumina short reads in small regions
frankzelph/fr-hit
frankzelph/open_pipelines
Pipelines for NGS data preprocessing by the Bock lab and friends
frankzelph/Prodigal
Prodigal Gene Prediction Software
frankzelph/Python-100-Days
Python - 100天从新手到大师
frankzelph/RNASeq
Tools for RNASeq analysis take file from SRA file to Fastq, run QC, map to genome and find DE genes.
frankzelph/Screening_Protocols_manuscript
Scripts from the Joung et al Nature Protocols 2016 manuscript on knockout and transcriptional activation screening
frankzelph/seqtk
Toolkit for processing sequences in FASTA/Q formats
frankzelph/Smart-seq3
Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).
frankzelph/tabtk
Toolkit for processing TAB-delimited format
frankzelph/test
RStudio_git test
frankzelph/transcriptome_ana
Record the process for transcriptome analysis, including codes.