freezecoder

freezecoder's Stars

• nextflow-io/nextflow

  A DSL for data-driven computational pipelines

  Language:Groovy2.8k893.4k648

• thomasp85/patchwork

  The Composer of ggplots

  Language:R2.5k46362162

• nextflow-io/awesome-nextflow

  A curated list of nextflow based pipelines

  57733289

• Yang-Tang/shinyjqui

  jQuery UI Interactions and Effects for Shiny

  Language:R274109833

• timelyportfolio/d3r

  d3.js helpers for R

  Language:R155131116

• CRG-CNAG/CalliNGS-NF

  GATK RNA-Seq Variant Calling in Nextflow

  Language:Nextflow13292655

• 4dn-dcic/tibanna

  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

  Language:Python70157428

• kuleshov/gwaskb

  Machine-curated database of genetic disease and genome-wide association studies

  Language:Jupyter Notebook567214

• JohnCoene/countup

  ⏱️ countup.js R htmlwidget

  Language:R39443

• noahgift/spot_price_machine_learning

  Machine Learning for Spot Prices

  Language:Jupyter Notebook267422

• ncsa/MayomicsVC

  Variant Calling Pipeline in Cromwell/WDL

  Language:Shell211724

• BioDepot/RNA-seq-lambda

  Rapid RNA-seq pipeline using AWS lambda functions for alignment

  Language:Python13302

• riverlee/viewFusion

  View fusion event by circos plot

  10205

• pearcetm/jscomut

  An interactive co-mutation plot generator, in-browser but fully client-side. Load a data file, play with the geometry of the chart, explore your data, and save an svg file.

  Language:JavaScript7322

• brspurri/google-genomics-pipeline-runner-examples

  Examples of Google Genomics Pipelines run via google-genomics-pipeline-runner.

  Language:Python5202

• jaehyeon-kim/more-thoughts-on-shiny

  Language:JavaScript4300

• ncsa/Swift-T-Variant-Calling

  Language:Swift47171