freiburgermsu/WCMpy

A Python package for Whole-Cell simulations

PythonMIT

A Whole Cell Model of a cocci Bacterium in Python

Installation

The following command installs WCMpy in a command prompt/terminal environment:

pip install wcmpy

ChemMW

init

The data environment, in a Python IDE, is defined:

import chemw
chem_mw = chemw.ChemMW(verbose = False, printing = True)

verbose & printing bool: specifies whether troubleshooting information or MW results will be printed, respectively.

mass()

The parameterized data is fitted to the Hill equation, with the following arguments and their default values:

chem_mw.mass(formula)

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Accessible content

The WCMpy object retains numerous components that are accessible to the user:

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