Pinned Repositories
bee_microbome_allelic_div
bioconda-recipes
Conda recipes for the bioconda channel.
FuncDiv
R package for computing alpha and beta contributional diversity metrics
FuncDiv_manuscript
Code used for showcasing the FuncDiv R package
handy_pop_gen
Functions and scripts for computing basic molecular evolution and population genetics metrics, used for multiple projects
pangenome_pseudogene_null
parallel_joblog_summary
Summarizing GNU parallel joblog file
picrust2_manuscript
POMS
Phylogenetic Organization of Metagenomic Signals (POMS)
q2-picrust2
QIIME 2 plugin for PICRUSt2
gavinmdouglas's Repositories
gavinmdouglas/picrust2_manuscript
gavinmdouglas/POMS
Phylogenetic Organization of Metagenomic Signals (POMS)
gavinmdouglas/FuncDiv
R package for computing alpha and beta contributional diversity metrics
gavinmdouglas/q2-picrust2
QIIME 2 plugin for PICRUSt2
gavinmdouglas/FuncDiv_manuscript
Code used for showcasing the FuncDiv R package
gavinmdouglas/handy_pop_gen
Functions and scripts for computing basic molecular evolution and population genetics metrics, used for multiple projects
gavinmdouglas/pangenome_pseudogene_null
gavinmdouglas/parallel_joblog_summary
Summarizing GNU parallel joblog file
gavinmdouglas/bee_microbome_allelic_div
gavinmdouglas/bioconda-recipes
Conda recipes for the bioconda channel.
gavinmdouglas/canola_pseudomonas_RNAseq
Data and code used for Cook et al. manuscript
gavinmdouglas/DA_hackathon_sanity_checks
Extra sanity checks for analyses run as part of microbiome differential abundance testing paper. Main repository here: https://github.com/nearinj/Comparison_of_DA_microbiome_methods
gavinmdouglas/galaxy_convert_biom
Galaxy tools for converting between different BIOM formats or to STAMP
gavinmdouglas/caps_2021_survey
CAPS 2021 Postdoc Survey Analysis
gavinmdouglas/codon_tables
NCBI codon tables in simple format
gavinmdouglas/EMBER3D
Ultra-fast in-silico structure mutation
gavinmdouglas/gavinmdouglas.github.io
gavinmdouglas/HoMer_workflow
Commands and scripts for running HoMer and RANGER-DTL
gavinmdouglas/lab_website
gavinmdouglas/Lebanon_COVID
gavinmdouglas/Myles_GBS_analysis
Scripts used to to help automate the ABC SNP calling pipeline
gavinmdouglas/POMS_manuscript
gavinmdouglas/taxa_sanity_check