gbdias

Bioinformatician at @NBISweden working on genome assembly and annotation.

Uppsala UniversityUppsala, Sweden

Pinned Repositories

blobtoolkit
Interactive quality assessment of genome assemblies
Language:JavaScript90 3 13312
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
Language:Perl373 23 82882
TSEBRA
TSEBRA: Transcript Selector for BRAKER
Language:Python48 4 425
Earth-Biogenome-Project-pilot
Assembly and Annotation workflows for analysing data in the Earth Biogenome Project pilot project.
Language:Nextflow0 0 00
teloview
A simple R shiny app to visualize contigs, scaffolds, and telomere motifs.
Language:R3 2 00
Training-Tech-shorts
Short lessons, training various technologies useful to our work.
Language:TeX0 0 00
workshop-r
Workshop • R Programming Foundations for Life Scientists • 5 days
Language:CSS0 0 00
gffcompare
classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF
Language:C++207 14 9332
MBG
Language:C++59 4 262
pipelines-nextflow
A set of workflows written in Nextflow for Genome Annotation.
Language:Nextflow44 37 5918

gbdias/teloview
A simple R shiny app to visualize contigs, scaffolds, and telomere motifs.
Language:R3 2 00
gbdias/Earth-Biogenome-Project-pilot
Assembly and Annotation workflows for analysing data in the Earth Biogenome Project pilot project.
Language:Nextflow0 0 00
gbdias/Training-Tech-shorts
Short lessons, training various technologies useful to our work.
Language:TeX0 0 00
gbdias/workshop-r
Workshop • R Programming Foundations for Life Scientists • 5 days
Language:CSS0 0 00