gdlc/BGLR-R

Issues

• Setting the environments as fixed effects.

  #78 opened 7 months ago by celiasp1
  0

• !!!help!

  #77 opened 9 months ago by N-yating
  1

• Resolved: On MacOS 12.6 (Monterey) ld: library not found for -lgfortran

  #69 opened 9 months ago by sheinasim
  2

• fit pedigree matrix in unbalanced design

  #72 opened a year ago by jguo9527
  0

• Error in rinvGauss(n = ETA[[j]]$p, nu = nu, lambda = ETA[[j]]$lambda2) : nu must be positive

  #75 opened a year ago by isaamael
  0

• Issue with sparse response matrix

  #74 opened a year ago by SimonRio
  2

• Change to new cran checks badge URL

  #68 opened a year ago by sckott
  1

• Error in factanal(covmat = Cov$Omega, factors = Cov$nF) : unable to optimize from this starting value

  #73 opened a year ago by igorkf
  2

• mixed recursive models

  #66 opened 2 years ago by MarcoRMz95
  0

• fille connection issue

  #71 opened 2 years ago by jguo9527
  0

• Autocorrelation problem with MCMC steps

  #70 opened 2 years ago by RenatoCarvalhoMenezes
  0

• is BRR in the BGLR package have exactly same statistics calculation as rrBLUP (Ridge-regression BLUP) ?

  #67 opened 2 years ago by huw143
  0

• Computing time

  #65 opened 2 years ago by david-cros
  0

• readBinMat for Multitrait

  #64 opened 3 years ago by cheuerde
  3

• Calculation of "Broad-sense heritability" with various GRMs

  #63 opened 3 years ago by HONG-genetics
  0

• Mismatch between specified and final probIn (BayesC)

  #62 opened 3 years ago by cruyffturn
  0

• Feature Request: Option to disable saving the output

  #59 opened 3 years ago by cruyffturn
  1

• Warm starting the Gibbs sampling

  #60 opened 3 years ago by cruyffturn
  2

• Missing value in genotype

  #57 opened 3 years ago by huw143
  2

• Option to save samples of marker effects

  #56 opened 3 years ago by gregorgorjanc
  2

• How to use fixed variance components in Multitrait function?

  #55 opened 4 years ago by HONG-genetics
  2

• Model with fixed effects and pedigree

  #31 opened 6 years ago by volpatoo
  5

• Multitrait function not found in Multitrait model

  #54 opened 4 years ago by Dipendra031
  2

• Reliability estimate

  #9 opened 8 years ago by makgeha
  3

• Can I use FALSE for scale(), such as scale(X,center=FALSE, scale=FALSE)?

  #51 opened 4 years ago by congzhouczcz
  1

• Warnings since R 4.0 because class(MATRIX) = c("matrix", "array") now

  #50 opened 4 years ago by mlell
  1

• Scale parameter in LP 2 was missing and was set to NA

  #49 opened 5 years ago
  1

• Error in eigen(LT$K) : infinite or missing values in 'x'

  #48 opened 5 years ago by congzhouczcz
  0

• QUE about Heritability Estimation

  #47 opened 5 years ago by Yoledou
  1

• How to view the results of Cross-validation using a loop

  #46 opened 5 years ago by Yoledou
  2

• Installation failed on Windows

  #1 opened 5 years ago
  0

• Need some help using GxE interaction model

  #28 opened 5 years ago by rathdebi
  0

• Unexpected number of fields in ped file

  #30 opened 5 years ago by xinshuaiqi
  2

• Meaning of d in BGLR output

  #32 opened 5 years ago by malachycampbell
  5

• Adjust for genetic relationship matrix?

  #34 opened 5 years ago by complexgenome
  2

• Saved sampler trace stored too lossy if options(digits= ...) is set to a low value

  #33 opened 5 years ago by mlell
  1

• Working with out-of-memory matrices

  #29 opened 6 years ago by privefl
  1

• warning message

  #4 opened 6 years ago by funkhou9
  2

• Missing values X

  #16 opened 6 years ago by PeterJaksons
  1

• Push this version to CRAN?

  #17 opened 6 years ago by muschellij2
  1

• within family genomic heritabiity

  #21 opened 6 years ago by balathumma10
  0

• How to predict New y when adding new samples?

  #19 opened 7 years ago by xiekunwhy
  2

• Repository Consolidation

  #3 opened 7 years ago by agrueneberg
  0

• option for a multivariate response?

  #15 opened 8 years ago by jacquelineszt
  3

• Substantial heritability with simulated random outcome

  #14 opened 8 years ago by aneumann-science
  2

• BayesB specifiation

  #11 opened 8 years ago by stghn
  12

• cross-validation for binary or categorical trait

  #12 opened 8 years ago by stghn
  3

• Genomic heritability

  #13 opened 8 years ago by stghn
  0

• R version requirement too high

  #2 opened 9 years ago by agrueneberg
  5