gefeiwang's Stars
szcf-weiya/ESL-CN
The Elements of Statistical Learning (ESL)的中文翻译、代码实现及其习题解答。
emdann/milopy
Python implementation of Milo for differential abundance testing on KNN graph
SydneyBioX/scPB
Single cell perturbation benchmarking
gregbellan/Stabl
bowang-lab/DeepVelo
davidliwei/PS
Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights in single-cell perturbation datasets.
bunnech/cellot
Learning Single-Cell Perturbation Responses using Neural Optimal Transport
yyLIU12138/INSTINCT
Multi-sample integration of spatial chromatin accessibility sequencing data via stochastic domain translation
shap/shap
A game theoretic approach to explain the output of any machine learning model.
Durenlab/LINGER
gao-lab/GLUE
Graph-linked unified embedding for single-cell multi-omics data integration
jasonppy/VoiceCraft
Zero-Shot Speech Editing and Text-to-Speech in the Wild
yiqunchen/GenePT
PKU-YuanGroup/Open-Sora-Plan
This project aim to reproduce Sora (Open AI T2V model), we wish the open source community contribute to this project.
Janezjz/cellanova
CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration
aertslab/scenicplus
SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.
swaruplabUCI/ArchRtoSignac
An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)
kaneplusplus/icd-10-cm-embedding
LLM Embeddings for ICD 10 Data
drieslab/spatial-datasets
overview of spatial datasets
sbci-brain/SBCI_Toolkit
MATLAB scripts for visualisation and analysis of SBCI data
molecular-neuroimaging/Imaging_Transcriptomics
A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
phbradley/conga
Clonotype Neighbor Graph Analysis
rmarkello/abagen
A toolbox for working with Allen Human Brain Atlas microarray expression data
BMHLab/AHBAprocessing
wanglab-broad/CAST
CAST package
netneurolab/markello_transcriptome
Code and documentation supporting Markello et al, 2021, "Standardizing workflows in imaging transcriptomics with the abagen toolbox" (Biorxiv)
theislab/ehrapy
Electronic Health Record Analysis with Python.
MarioniLab/miloR
R package implementation of Milo for testing for differential abundance in KNN graphs
hamed1375/Exphormer
Exphormer: Sparse Transformer for Graphs
Wayfear/BrainNetworkTransformer
The open-source implementation of the NeurIPS 2022 paper Brain Network Transformer.