genemine/iread

Issues

• By using the test script you provided, the output produce all 0 results which is not correct right?

  #10 opened 2 years ago by kailingli
  2

• Suggestion on the hashbang

  #12 opened 2 years ago by lucacozzuto
  2

• help is not describing a number of features

  #11 opened 2 years ago by lucacozzuto
  0

• ValueError: could not convert string to float: chrX-19961845-19963954-FBtr0070000-2109-+

  #9 opened 3 years ago by yancychy
  8

• About the index

  #8 opened 3 years ago by CYcodeworld
  1

• output empty file

  #1 opened 4 years ago by immuneAI
  4

• Typo in count_intronic_reads.pl

  #2 opened 4 years ago by CrazyHsu
  2

• Get error when applying iREAD?

  #3 opened 4 years ago by ucbtsh6
  4

• All introns have 0 FPKM

  #4 opened 4 years ago by maryawood
  2

• Array indices in assess_intron.py need to be shifted by 1

  #6 opened 4 years ago by koustav-pal
  1

• does the input require genomic or transcriptomic BAM from STAR

  #5 opened 4 years ago by scseekers
  1