Issues
- 2
Phenotype of test_data
#81 opened by huthvincent - 2
Pathway PRS using PRScs
#80 opened by dagherlab - 4
Script cannot read --sst_file
#79 opened by kllrdr - 5
Module 'scipy' has no attribute 'sqrt'
#73 opened by TheBil99 - 4
- 2
GWAS sample size
#78 opened by frahimov - 0
PRS for individuals
#77 opened by chopraamhk - 2
Slight differences when using OR + P and OR + SE
#75 opened by cnl27 - 1
Alternatives to rs_id for SNP id
#74 opened by TheBil99 - 1
PRS-cs: taking 2 SNPs as an example
#72 opened by jielab - 3
Making sense of the LD reference file for PRS-cs
#71 opened by jielab - 4
plink --score
#69 opened by lhl-0419 - 8
How to create own reference Panel?
#64 opened by Sohambiswas8 - 2
- 4
How to find optimal phi value
#65 opened by Dragonfly1108 - 2
- 2
LD reference panel for UK Biobank analyses
#67 opened by cnl27 - 6
A beginner's question about LD matrices
#61 opened by KaiYi1104 - 2
about score
#63 opened by SoleilChenxu - 2
PRScs/mcmc_gtb.py:57: ComplexWarning: Casting complex values to real discards the imaginary part
#62 opened by Chris-Kato - 2
BETA + SE still transformed to Z-scores?
#60 opened by euffelmann - 2
LD reference panel
#59 opened by HelenYSLin - 2
No BIM Filter?
#58 opened by MatthewMaher - 2
SNP id
#57 opened by SoleilChenxu - 1
Effect Allele
#56 opened by rameez500 - 2
list index out of range
#55 opened by rameez500 - 3
Is progress printing deferred?
#54 opened by carbocation - 1
- 3
PRScs-auto
#53 opened by rameez500 - 8
Freezing at parse reference LD on chromosome 22 step
#45 opened by dietina - 2
Q about hm3 variants
#51 opened by gunns2 - 1
PRScs fails to run with scipy-1.9.3
#49 opened by pettyalex - 1
Multi-ethnic Polygenic Score
#48 opened by rameez500 - 5
HapMap Variants
#47 opened by rameez500 - 1
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte
#46 opened by dietina - 1
Recommend reference panel?
#44 opened by euffelmann - 4
small variance explained by PRScs
#42 opened by tycui - 2
Failing to parse the test summary stats
#43 opened by rchapleau - 1
my PRS score range
#41 opened by forevertl - 1
[SNP matching] For SNPs that have the same rsid
#39 opened by soowhee - 4
- 4
Candidate gene
#38 opened by ooozcl - 2
Handling variable sample sizes?
#37 opened by kimsin98 - 4
- 1
--ref_dir parsing issue
#35 opened by vaqm2 - 2
Question about method
#34 opened by kforthman - 16
ZeroDivisionError: float division by zero
#30 opened by yang-lina - 1
My code does not move to the MCMC step
#31 opened by jystatistics - 6
UnboundLocalError: local variable 'ref_dict' referenced before assignment
#33 opened by petertanksley - 4
PRScs does not acknowledge n_gwas
#32 opened by petertanksley