ggavelis

ggavelis's Stars

• ablab/spades

  SPAdes Genome Assembler

  Language:C++737321.1k134

• Ecogenomics/GTDBTk

  GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

  Language:Python4662345383

• kshulgina/codetta

  Language:Python48539

• josuebarrera/GenEra

  genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.

  Language:Shell464166

• Zheludev/VNom

  Viroid Nominator (VNom): reference free tool for nominating viroid-like de novo assembled contigs

  Language:Python12303

• kolecko007/WinstonCleaner

  Language:Python5402

• aleixop/eukaryotesV4

  Curated database of V4 region of 18S rDNA

  4010

• BigelowLab/gorg-classifier

  Produce taxonomic and functional annotations of shotgun metagenomes, metatranscriptomes and metaproteome sequences.

  Language:Nextflow45110

• aleixop/Malaspina_Euk_mTags

  Code and data included in Obiol et al. (2020), "A metagenomic assessment of microbial eukaryotic diversity in the global ocean"

  Language:R1111