gilesc

gilesc's Stars

• gilesc/fun

  Collection of small programs for fun & learning

  Language:Clojure1

• google/autoparse

  A dynamically generated parsing system using JSON Schema.

  Language:Ruby14433

• ajmazurie/xstats.MINE

  Python wrapper for the Java-based Maximal Information-based Nonparametric Exploration (MINE) statistics library

  Language:Python199

• clojurenlp/core

  Clojure wrapper for the Stanford CoreNLP Java library

  Language:Clojure10533

• gilesc/factor-graph

  Belief propagation over factor graphs in directed & undirected PGMs

  Language:Clojure122

• nesquena/gitdocs

  Open-source Dropbox using Ruby and Git

  Language:JavaScript1.1k48

• gilesc/ahocorasick

  Fast string searching in various languages (Clojure, C++)

  Language:C++11

• gilesc/seqsei

  Functional prediction for genes & non-coding elements

  Language:R1

• gilesc/BioMart-Client

  Clojure library for querying BioMart unRESTful web services

  Language:Clojure1

• weavejester/codox

  Clojure documentation tool

  Language:Clojure66797

• gilesc/litberator

  Retrieve PDFs from a PubMed query string

  Language:Clojure1

• brentp/cruzdb

  python access to UCSC genomes database

  Language:Python13542

• gilesc/lein-chronic

  Schedule leiningen tasks for timed execution.

  Language:Clojure1

• gilesc/lein-condor

  Parallelize Clojure on a Condor cluster.

  Language:Clojure1

• gilesc/gseconvert

  Constructs and preprocesses a gene expression matrix from raw GSEs for use in meta-analyses

  Language:R1

• mdozmorov/Quantile-normalization

  Quantile normalization of gene expression matrix with missing values

  Language:Visual Basic1

• gilesc/nlptk

  NLP utilities (NER, parsers, corpus readers), wrapped in Clojure.

  Language:Clojure3

• JuliaLang/julia

  The Julia Programming Language

  Language:Julia46.2k5.5k

• stathissideris/clarity

  A wrapper for Swing aiming to provide more concise syntax and extra functionality. Still in heavy development, syntax may change radically.

  Language:Clojure621

• levskaya/BioJSON

  Parsers to wrangle the plethora of biological flatfile formats into standard JSON

  Language:Python101

• wagjo/borneo

  Clojure wrapper for Neo4j, a graph database.

  Language:Clojure9314

• deweylab/RSEM

  RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

  Language:C++424118

• jckarter/clay

  The Clay programming language

  Language:C++40433

• leadtune/clj-ml

  A machine learning library for Clojure built on top of Weka and friends

  Language:Clojure379

• gilesc/GOGraph

  .NET library for finding shortest paths in Gene Ontology.

  Language:Visual Basic11

• lancepantz/clojure-solr

  solr bindings for clojure

  Language:Clojure72

• ray1729/BioMart-Client

  Clojure library for querying BioMart unRESTful web services

  Language:Clojure31

• jandot/bioclojure

  Seed of a bioclojure library

  Language:Clojure378

• clojure/clojure

  The Clojure programming language

  Language:Java10.5k1.5k

• pezmaster31/bamtools

  C++ API & command-line toolkit for working with BAM data

  Language:C++421154