giopina

Freie Universitaet BerlinBerlin, Germany

Pinned Repositories

barnaba
Analyse Nucleic Acids Structure and Simulations with baRNAba
Language:Jupyter Notebook00
enm_code
C code to construct elastic network models for RNA molecules
Language:C++10
mdtraj
A modern, open library for the analysis of molecular dynamics trajectories
Language:C00
pydca
mean-field Direct Coupling Analysis
Language:Python42
udpclust
My version of the unsupervised density peak clustering algorithm of Rodriguez and Laio 2013
Language:Python10
barnaba
Analyse Nucleic Acids Structure and Simulations with baRNAba
Language:Jupyter Notebook37 11 2815
oligonucleotides-kinetics
IPython analysis notebooks for Markov state models of oligonucletides
Language:Jupyter Notebook4 4 01

giopina's Repositories

giopina/pydca
mean-field Direct Coupling Analysis
Language:Python42
giopina/enm_code
C code to construct elastic network models for RNA molecules
Language:C++10
giopina/udpclust
My version of the unsupervised density peak clustering algorithm of Rodriguez and Laio 2013
Language:Python10
giopina/barnaba
Analyse Nucleic Acids Structure and Simulations with baRNAba
Language:Jupyter Notebook00
giopina/mdtraj
A modern, open library for the analysis of molecular dynamics trajectories
Language:C00