srnas/barnaba

Issues

• how to plot svg files from out file ( barnaba SEC_STRUCTURE Command )

  #61 opened a year ago by vas2201
  1

• Recovering backbone connections

  #60 opened a year ago by cgoliver
  0

• Correspondence between PDB chain/residue identifiers and `bb.annotate()` output

  #59 opened a year ago by cgoliver
  0

• Barnaba usage for kink-turns in Python with custom pdb files

  #58 opened 2 years ago by theoboury
  0

• Use scikit-learn instead of sklearn

  #56 opened 2 years ago by niz-ka
  0

• [Question] Threshold used to define base stacking

  #52 opened 2 years ago by kntkb
  1

• Installation problem

  #47 opened 3 years ago by sreisser
  2

• Torsion values in case of missing residue

  #46 opened 3 years ago by mandar5335
  0

• Calculating Pseudotorsion angle

  #45 opened 3 years ago by mandar5335
  3

• for RNA Analysis

  #44 opened 4 years ago by Ompal12
  2

• SEC_STRUCTURE problem

  #43 opened 4 years ago by LarrySMelidis
  1

• Modified residues

  #42 opened 4 years ago by tiafonderson
  2

• does not support calculate base-phosphate interaction

  #40 opened 6 years ago by zhanghaomiao
  0

• Pyemma compatibility

  #37 opened 6 years ago by giopina
  0

• new release

  #36 opened 6 years ago by GiovanniBussi
  2

• all-atoms/backbone only RMSD

  #33 opened 6 years ago by sbottaro
  1

• add regtest and examples for secondary structure drawings

  #34 opened 7 years ago by sbottaro
  0

• BUG annotate conversion to dotbracket

  #31 opened 7 years ago by sreisser
  1

• setuptools_scm does not work with git archives

  #18 opened 7 years ago by GiovanniBussi
  4

• ENM example does not work

  #25 opened 7 years ago by sbottaro
  2

• ENM Travis Fail

  #22 opened 7 years ago by sbottaro
  1

• support mmCIF format

  #17 opened 7 years ago by sbottaro
  0

• output for different pdb models in ANNOTATE

  #16 opened 7 years ago by sreisser
  0

• Possible issue with python3

  #13 opened 7 years ago by GiovanniBussi
  2

• Sparse ENMs

  #4 opened 7 years ago by GiovanniBussi
  11

• Testing

  #5 opened 7 years ago by giopina
  3

• Test failure

  #6 opened 7 years ago by giopina
  5

• Add check for trjconv

  #1 opened 9 years ago by GiovanniBussi
  0