Pinned Repositories
A188Ref1
the process to build the first A188 reference genome
cDNA_Cupcake
Miscellaneous collection of Python and R scripts for processing Iso-Seq data
gpt-3
GPT-3: Language Models are Few-Shot Learners
isONcorrect
Error correction of ONT transcript reads
methplotlib
Plotting tools for nanopore methylation data
MINES
(m)6A (I)dentification Using (N)anopor(E) (S)equencing
nanopolish
Signal-level algorithms for MinION data
NanoSim
Nanopore sequence read simulator
pacbio_genome_assembly_usingCanu
Porechop
adapter trimmer for Oxford Nanopore reads
glin0311's Repositories
glin0311/A188Ref1
the process to build the first A188 reference genome
glin0311/cDNA_Cupcake
Miscellaneous collection of Python and R scripts for processing Iso-Seq data
glin0311/gpt-3
GPT-3: Language Models are Few-Shot Learners
glin0311/isONcorrect
Error correction of ONT transcript reads
glin0311/methplotlib
Plotting tools for nanopore methylation data
glin0311/MINES
(m)6A (I)dentification Using (N)anopor(E) (S)equencing
glin0311/nanopolish
Signal-level algorithms for MinION data
glin0311/NanoSim
Nanopore sequence read simulator
glin0311/pacbio_genome_assembly_usingCanu
glin0311/Porechop
adapter trimmer for Oxford Nanopore reads
glin0311/pychopper
A tool to identify full length cDNA reads
glin0311/reorientexpress
Transcriptome long-read orientation with Deep Learning
glin0311/TBtools
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
glin0311/teaching
Teaching materials
glin0311/Unicycler
hybrid assembly pipeline for bacterial genomes