Issues
- 3
when dealing with big genomes, the error occurs: "the input alignment file is not sorted!"
#391 opened - 0
Segmentation fault only in "-mix" mode.
#390 opened - 6
Segmentation fault 11
#389 opened - 1
Some problem with Stringtie prepDE.py
#388 opened - 1
- 0
- 1
- 0
- 3
One gene outputs multiple TPM values
#382 opened - 1
Issue: could not locate transcript gene
#381 opened - 0
StringTie gives incorrect 5 end.
#380 opened - 0
Coverage in output gif file
#379 opened - 1
stringtie recognizes and converts CDS?
#378 opened - 0
- 0
Stringtie skips some reference gene ids
#375 opened - 0
gene/transcript abundance
#374 opened - 0
- 0
- 0
- 0
- 0
- 0
- 0
FPKM filter in stringtie --merge
#365 opened - 0
- 2
- 2
Error: no valid ID found for GFF record
#361 opened - 2
- 1
Segmentation Fault when merge scallop2 gtfs
#359 opened - 1
--mix with -e loses guide transcripts
#358 opened - 5
duplicate transcript output with -L -e
#357 opened - 7
- 0
- 0
- 0
- 0
stringtie/2.0.3 ignoring reads
#352 opened - 6
How to filter the merged transcripts
#351 opened - 2
--merge disregards -G option?
#350 opened - 3
Expected ballgown output when not using '-e'
#349 opened - 4
Mangled new lines in coverage gtf file
#348 opened - 2
running with point feature file
#347 opened - 0
- 0
Malformed t_data.ctab file
#345 opened - 0
Gene id duplication caused by prepDE3.py
#344 opened - 1
- 0
- 0
- 1
- 3
- 5
prepDE.py error: could not locate transcript
#337 opened - 0