hackseq19

Organizational files and discussions about hackseq 2019

For details about last years hackathon, checkout our wiki below.

hackseq18 Organizational Wiki (HOWTO)

Question? --> Email Us

When? Where? What?

We are having a Genomics Hackathon in Vancouver in 2019.

The website for the event lives here: http://www.hackseq.com/

The twitter account for this event is @hackseq

This event will be modeled on the NCBI hackathon format.

Organizing Committee

Emre Erhan (@emreerhan)
Kristen Gray (@klgray25)
Justin Jia (@imasianxd)
Jennifer Lin (@jenjaelin)
Sasha Maslova (@smaslova)
Noushin Nabavi (@NoushinN)
Baraa Orabi (@baraaorabi)
Alex Sweeten (@sweetiepi)
Aris Grout (@arisgrout)
David Guo (@itsDagu)
Kate Gibson (@kfgibson)
Ogan Mancarcı (@oganm)
Reva Shenwai (@scatcher125)

hackseq19 Projects

#	Project name	Team lead	Co-lead	Repo
1	BeRi Environments for R Installations	Rob Gilmore		https://github.com/hackseq/hs19-beri
2	Yeast-omics	Noushin Nabavi	Matt Emery	https://github.com/hackseq/hs19-yeast
3	Rule-based Learning for Transcriptional Regulation	Alex Sweeten		https://github.com/SweetiePi/rule-based-learning
4	BugSeq	Sam Chorlton		https://github.com/schorlton/bugseq-web
5	Mapping Polypharmacy Chemical Reactions in At-Risk Populations	Artem Babaian	German Novakovsky	https://github.com/hackseq/hs19-game
6	TALR: Targeted Assembly of Linked Reads	Shaun Jackman		https://github.com/hackseq/hs19-talr
7	Visualizing Very Large Biological Networks	Anamaria Crisan		https://github.com/hackseq/hs19-biovis
8	Trends in Bioinformatics with RLadies	Jasmine Lai	Raissa Philibert	https://github.com/hackseq/hs19-trends
9	TraIN (Translating from Immunology to Neuroscience)	Lucia Guerri		https://github.com/hackseq/hs19-train
10	Hypothesis-Bio Automated Bioinformatics Bug Discovery	Benjamin Lee		https://github.com/Lab41/hypothesis-bio
11	Development of an interpretable deep learning framework to detect epistatic interactions between SNPs	Sean La	Habib Daneshpajouh	https://github.com/hackseq/hs19-deep
12	BiocSwirl()Terminal based Bioconductor Courses	Lisa N. Cao	Mariam Arab	https://github.com/lisancao/biocswirl
13	Predicting Short-Term Success of Influenza Virus Variants	Caroline Colijn	Priscila Biller & Maryam Hayati	https://github.com/hackseq/hs19-flu
14	Mapping Polypharmacy Chemical Reactions in At-Risk Populations	Veena Ghorakavi		https://github.com/hackseq/hs19-pop
15	Virtual and Augmented Reality for Single-Cell Data Exploration	Michael Vinyard	Luca Pinello	https://github.com/hackseq/hs19-var