graspologic-org/graspologic

Issues

• Considering removing gensim as a dependency

  #1091 opened 3 months ago by bdpedigo
  7

• Add support for sparse gradient computation in `graph_match`

  #1086 opened 7 months ago by bdpedigo
  0

• Readme install instructions no longer match reality

  #1084 opened 7 months ago by bryantower
  0

• Add CITATION.cff file

  #1021 opened 8 months ago by j1c
  2

• symmetrize binary graph

  #940 opened 8 months ago by jovo
  2

• add hierarchical clustering tutorial

  #951 opened 8 months ago by loftusa
  0

• [BUG] Does SSG handle ties appropriately?

  #977 opened 8 months ago by ebridge2
  0

• Propose removing I-DAD as a laplacian

  #970 opened 8 months ago by bdpedigo
  1

• Add 2-sample tests under ER, SBM, density adjusted SBM models

  #941 opened 8 months ago by bdpedigo
  1

• MatplotlibDeprecationWarning to address

  #1026 opened 8 months ago by bdpedigo
  0

• Sklearn FutureWarning to address

  #1028 opened 8 months ago by bdpedigo
  0

• [BUG] The docs do not reflect the modification of the graph_match module

  #1042 opened 8 months ago by ebridge2
  1

• [BUG] Scipy deprecations causing importerrors in gensim

  #1059 opened 8 months ago by j1c
  4

• [MAINT] black formatting rules updated in 2024

  #1061 opened 8 months ago by j1c
  1

• [Question] Is Windows 11 OS supported?

  #1058 opened a year ago by KaifAhmad1
  1

• [BUG] graspologic takes 33 seconds to import

  #1035 opened 2 years ago by loftusa
  9

• [BUG] SBMEstimator throws an error when "loops=False" and some block has size 1

  #1055 opened a year ago by bokveizen
  0

• Numpy DeprecationWarning to address

  #1027 opened 2 years ago by bdpedigo
  1

• [Question] Running Leiden community detection on random graph generates multiple communities

  #1053 opened a year ago by johandahlberg
  3

• [Question] coefficient magnitude, GCT

  #1052 opened a year ago by jamesdalg
  5

• The whole package works with numpy matrices; why doesn't node2vec?

  #1045 opened 2 years ago by ebridge2
  1

• [BUG] Numba warnings

  #1043 opened 2 years ago by ebridge2
  0

• [BUG] The package is extraordinarily difficult to install

  #972 opened 2 years ago by ebridge2
  9

• [BUG] What does "Spectral Vertex Nomination" implement?

  #1030 opened 2 years ago by ebridge2
  1

• Update package to use new scipy sparse *array* standard

  #961 opened 2 years ago by bdpedigo
  0

• Impossible to use, get error message AttributeError: module 'numpy' has no attribute 'object' [BUG]

  #1005 opened 2 years ago by yannis1962
  4

• Audit test warnings for deprecation warnings

  #1011 opened 2 years ago by bdpedigo
  1

• Installing graspologic on M1

  #1007 opened 2 years ago by adikondepudi
  1

• This repo is missing important files

  #948 opened 2 years ago by microsoft-github-policy-service
  3

• [BUG] SSG doesn't look like it properly handles ties?

  #944 opened 2 years ago by ebridge2
  1

• [BUG] Following the first tutorial on the documentation, first example fails due to networkx

  #1020 opened 2 years ago by aad1tya
  2

• [BUG] graspologic v.2.0.1 and networkx 3.0 incompatibility leads to a crash

  #1015 opened 2 years ago by alyakin314
  1

• [BUG] Error in `graph_match` with optimal transport

  #1008 opened 2 years ago by aurorarossi
  10

• [BUG] giant gensim error when trying to pip install on 3.10.6

  #998 opened 2 years ago by loftusa
  2

• Ensure we have a non-dev-mode install of graspologic as part of CI/CD workflow

  #1009 opened 2 years ago by bdpedigo
  0

• [BUG] typing_extensions not found when trying to install graspologic from dev branch

  #983 opened 2 years ago by j1c
  0

• [BUG] Graph matching errors when similarity matrix has unequal dimensions

  #1001 opened 2 years ago by dokato
  0

• [BUG] Remove outdated Zenodo DOI from README.md

  #993 opened 2 years ago by bdpedigo
  5

• [BUG] Reporting fails due to upstream issue (matplotlib)

  #995 opened 2 years ago by bdpedigo
  3

• Add graph encoder embedding

  #984 opened 2 years ago by bdpedigo
  0

• [BUG] graph matching performs poorly when seeded and using similarity

  #959 opened 2 years ago by bdpedigo
  0

• [BUG] MASE transform and fit separation

  #978 opened 2 years ago by dokato
  2

• Feature request: diagnostic tools for evaluating quality of graph matching

  #976 opened 2 years ago by ebridge2
  1

• Add sex information to mice dataset

  #966 opened 2 years ago by eigenvivek
  0

• [BUG] AutoGMM does poorly on well-separated clusters

  #975 opened 2 years ago by ebridge2
  0

• [BUG] Node2Vec fitting fails on graph with isolated nodes

  #952 opened 3 years ago by dokato
  0

• [BUG] Why is `pairplot` different for with labels and without?

  #971 opened 3 years ago by ebridge2
  0

• Two population of graph test

  #939 opened 3 years ago by jovo
  1

• Numba JITing should happen on import instead of construction

  #946 opened 3 years ago by bdpedigo
  2

• [BUG] VNviaSGM spuriously errors

  #949 opened 3 years ago by ebridge2
  0