Pinned Repositories
magi
Quickly find and score consensus between metabolite identifications and gene annotations
Plant_SC_velocity
dros-adaptive-tracking
genomic analyses for experimental evolution of 10 replicate drosophila populations adapting to seasonal shifts in outdoor cages
HAF-pipeline
a bash-based pipeline to calculate haplotype inferred allele frequencies from pool-seq data and founder SNP profiles
HAFpipe-line
calculate haplotype-derived allele frequencies for pool-seq samples
POOLSEQ1_fastq_to_bam
scripts for QC-ing paired-end fastq files and mapping them to a reference genome
POOLSEQ2_bam_to_rawAF
scripts to calculate allele frequencies at segregating sites from bam files for a set of pool-seq samples
greensii's Repositories
greensii/dros-adaptive-tracking
genomic analyses for experimental evolution of 10 replicate drosophila populations adapting to seasonal shifts in outdoor cages
greensii/HAF-pipeline
a bash-based pipeline to calculate haplotype inferred allele frequencies from pool-seq data and founder SNP profiles