grexor's Stars
Mayrlab/scUTRquant
Bioinformatics pipeline for single-cell 3' UTR isoform quantification
frattalab/PAPA
PAPA (Pipeline-Alternative Polyadenylation) - Snakemake pipeline for analysis of APA from short-read RNA-seq data
frattalab/rna_seq_snakemake
Snakemake Pipeline For RNA-Seq in UCL Cluster
frattalab/splicing
Snakemake pipeline for running MAJIQ
ulelab/ultraplex
Ultra-fast 5' and 3' demultiplexer
bedapub/splicekit
splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq
ulelab/iCount-Mini
iCount, protein-RNA interaction analytics
ulelab/nf-quantseq
bedapub/besca
BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis
adnaniazi/tailfindr
An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.