Pinned Repositories
apa
apa: research platform for the study of alternative polyadenylation, expressRNA.org
APAeval
Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples
pybio
pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome assemblies and annotations, while also accommodating custom genomes via FASTA/GTF inputs.
python-plotting-tutorial
Short tutorial on python plotting
rnamotifs2
RNAmotifs2: cluster motif analysis of alternatively regulated features in splicing and polyadenylation
scanRBP
scanRBP loads RNA-protein binding motif PWM and computes the log-odds scores for all the loaded RBPs across a given genomic sequence + draws a heatmap of the scores.
teachingDocker
grexor's Repositories
grexor/apa
apa: research platform for the study of alternative polyadenylation, expressRNA.org
grexor/pybio
pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome assemblies and annotations, while also accommodating custom genomes via FASTA/GTF inputs.
grexor/scanRBP
scanRBP loads RNA-protein binding motif PWM and computes the log-odds scores for all the loaded RBPs across a given genomic sequence + draws a heatmap of the scores.
grexor/python-plotting-tutorial
Short tutorial on python plotting
grexor/rnamotifs2
RNAmotifs2: cluster motif analysis of alternatively regulated features in splicing and polyadenylation
grexor/teachingDocker
grexor/APAeval
Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples
grexor/bio609
grexor/BIO634_2020
grexor/bioconda-recipes
Conda recipes for the bioconda channel.
grexor/expressRNA
expressRNA repository
grexor/grexor
grexor/grexor.github.io
Personal home page
grexor/splicekit
grexor/youtube
Scripts for #OBS to generate pomodoro timers for my youtube channel.