Pinned Repositories
bioAnno
Build Annotation package by using information from KEGG, NCBI, Ensembl
CandiHap
Build haplotye and generate figures
EnrichR
Functional Enrichment Analysis and Network Construction
eoffice
Export and import graphics and tables to MicroSoft office
fctutils
The fctutils package provides a collection of utility functions for manipulating and analyzing factor vectors in R.
microbial
Do microbiome analysis with dada2 and phyloseq object
rcellmarker
Identify cell type based on cell markers for single cell squencing
richR
Function Enrichment analysis and Network construction
scGSVA
scGSVA: Perform GSVA for single cell RNA seq
VennDetail
VennDetail: a bioconductor package for VennDiagram visualization and details extraction
guokai8's Repositories
guokai8/scGSVA
scGSVA: Perform GSVA for single cell RNA seq
guokai8/eoffice
Export and import graphics and tables to MicroSoft office
guokai8/bioAnno
Build Annotation package by using information from KEGG, NCBI, Ensembl
guokai8/microbial
Do microbiome analysis with dada2 and phyloseq object
guokai8/rcellmarker
Identify cell type based on cell markers for single cell squencing
guokai8/richR
Function Enrichment analysis and Network construction
guokai8/o2plsda
Omics data integration with o2plsda
guokai8/d2l-zh-
《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。
guokai8/fctutils
The fctutils package provides a collection of utility functions for manipulating and analyzing factor vectors in R.
guokai8/rcolors
Functions with r colors
guokai8/scRNAseq-training
guokai8/annotated_deep_learning_paper_implementations
🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
guokai8/Book4_Power-of-Matrix
Book_4_《矩阵力量》 | 鸢尾花书：从加减乘除到机器学习；上架！
guokai8/C9_ALS_FTD_single_nuclei_transcriptome_epigenome
Code repository for analysis in "Divergent impacts of C9orf72 repeat expansion on neurons and glia in ALS and FTD"
guokai8/Cd8_T_cell
guokai8/ChatGPT
🔮 ChatGPT Desktop Application (Mac, Windows and Linux)
guokai8/ComputationalGenomicswithR
Computational Genomics with R
guokai8/drug2cell
Gene group activity utility functions for Scanpy
guokai8/fctutily
guokai8/hello-algo
《Hello 算法》：动画图解、一键运行的数据结构与算法教程。支持 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 代码。简体版和繁体版同步更新，English version ongoing
guokai8/Intro-to-R-flipped
guokai8/KEGGRESTpy
A Python package for interacting with the KEGG REST API.
guokai8/KrakenTools
KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
guokai8/Machine-Learning-Collection
A resource for learning about Machine learning & Deep Learning
guokai8/OnPLS
OnPLS: Orthogonal Projections to Latent Structures in Multiblock and Path Model Data Analysis
guokai8/pygsva
GSVA package for Python
guokai8/scellplot
single cell and spatial transcriptomics plot
guokai8/scRNA-seq_online
guokai8/tidygroup
Do analysis with group information
guokai8/visium_heart
Spatial transcriptomics of heart tissue