/ssc-denovos-paper

Scripts and notebooks for generating results in Mitra et al. 2020

Primary LanguageJupyter Notebook

DOI

ssc-denovos-paper

Scripts and notebooks for generating results in Mitra et al. 2020

Folders contain the following:

  • figure-notebooks-publish: Jupyter notebooks for generating figures.
  • AWS: scripts pipeline (GangSTR, dumpSTR, mergeSTR, monSTR, QC) on AWS.
  • scripts: scripts for QC and statistical testing of list of mutations.