hallucigenia-sparsa

Pinned Repositories

seqgroup
collection of R functions supporting the analysis of microbial sequencing data with a group structure
Language:R0 2 30
seqtime
The seqtime R package provides functions to analyse sequencing data time series and to simulate community dynamics
Language:HTML21 11 229
timeseries
Time series data accompanying "Signatures of ecological processes in microbial community time series"
32
miaSim
microbiome data simulation package
Language:R19 7 3510
.github
msysbio-welcome
2 2 00
BTRI_mucin_study_scripts
Scripts for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
Language:MATLAB0 1 00
GutMicrobes2022
Supplementary Material for van de Velde et al. Gut Microbes 2022
Language:R0 1 00

hallucigenia-sparsa's Repositories

hallucigenia-sparsa/seqtime
The seqtime R package provides functions to analyse sequencing data time series and to simulate community dynamics
Language:HTML21 11 229
hallucigenia-sparsa/timeseries
Time series data accompanying "Signatures of ecological processes in microbial community time series"
32
hallucigenia-sparsa/seqgroup
collection of R functions supporting the analysis of microbial sequencing data with a group structure
Language:R0 2 30