hanbinlu

AberrantSplice

Analyze and quantify the aberrant splice events from RNA-seq data

ActiveMotif_SpikeIn_ChIP_Analysis

Pipeline to analysis Spike-in ChIP-seq experiments using ActiveMotif spike-in chromatin workflow

gpu_iced

GPU implementation of ICE normalization on HiC matrix

hic_analysis_utils

hichip_object

hybrid_seurat_scanpy

Test crosstalk between seurat (R) and scanpy (Python) for single cell RNA-seq analysis

Immunodeficiency_Patient_ATAC

mES_to_Xen

Study the epigenome and 3D-genome coordinated regulation during mES differentiation to Xen

preproc_chip_like_data

useful_ref_from_DeepLearningAI

Design and implementation of state-of-the-art ML architectures derived from DeepLearningAI courses

hanbinlu/AberrantSplice

Analyze and quantify the aberrant splice events from RNA-seq data

hanbinlu/ActiveMotif_SpikeIn_ChIP_Analysis

Pipeline to analysis Spike-in ChIP-seq experiments using ActiveMotif spike-in chromatin workflow

hanbinlu/gpu_iced

GPU implementation of ICE normalization on HiC matrix

hanbinlu/hic_analysis_utils

hanbinlu/hichip_object

hanbinlu/hybrid_seurat_scanpy

Test crosstalk between seurat (R) and scanpy (Python) for single cell RNA-seq analysis

hanbinlu/Immunodeficiency_Patient_ATAC

hanbinlu/mES_to_Xen

Study the epigenome and 3D-genome coordinated regulation during mES differentiation to Xen

hanbinlu/preproc_chip_like_data

hanbinlu/scRNA_Portal_Prototype

A web-based scRNA-seq data dashboard

hanbinlu/useful_ref_from_DeepLearningAI

Design and implementation of state-of-the-art ML architectures derived from DeepLearningAI courses

hanbinlu/selfish

SELFISH is a tool for finding differential chromatin interactions between two Hi-C contact maps.