handwerkerd
Staff Scientist focusing on fMRI methodology, particularly removing systemic noise from data. PhD Bioengineering
Silver Spring, MD, USA
handwerkerd's Stars
vanandrew/medic_analysis
Various files and analysis for MEDIC paper
neuropsychology/NeuroKit
NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing
ofgulban/k_particles
OHBM 2023 Brainhack project
psb1558/Elstob-font
A variable font for medievalists
patrickmineault/codebook
The Good Research Code Handbook
markus-nilsson/mri-simulator
MRI simulator for educational purposes written in MATLAB
bomeara/collegetables
Making a website to help my kids with their college search.
bendhouseart/ActionMan
Fun to Funky
jbteves/archivotron
A suite of tools to help people organize their data
dominikkraft/Scientific_DataVis_Python
Introduction to scientific visualisation with python.
ME-ICA/tedana
TE-dependent analysis of multi-echo fMRI
jbteves/dtm_tools
Temporary tools to help with comparing decision tree modularized/unmodularized for tedana
AllenInstitute/deepinterpolation
imr-framework/pypulseq
Pulseq in Python
abhogal-lab/seeVR
Toolbox for analyzing cerebrovascular imaging data based on BOLD MRI
alylab/labmanual
Lab Manual for the Aly Lab at the University of California, Berkeley
NICHD-BSPC/documentation-template
Repository demonstrating how to deploy Sphinx documentation to GitHub Pages
niivue/niivue
a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.
jbteves/hpc_github
Helpful tips for using GitHub on biowulf
XinhuiLi/PipelineAgreement
Analysis Code for Paper "Moving Beyond Processing and Analysis-Related Variation in Neuroscience"
ManimCommunity/manim
A community-maintained Python framework for creating mathematical animations.
gferrazzi/WHOCARES
Perform cardiac signal regression of fMRI time-series as described in WHOCARES: Data-driven WHOle-brain CArdiac signal REgression from highly accelerated simultaneous multi-Slice fMRI acquisitions by Nigel Colenbier, Marco Marino, Giorgio Arcara, Blaise Frederick, Giovanni Pellegrino, Daniele Marinazzo, Giulio Ferrazzi - submitted manuscript
SteenMoeller/NORDIC_Raw
Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising
DrMichaelLindner/MAP4SL
Mulitband Artefact Probe for Slice Leakage
ME-ICA/me-ica.github.io
Landing page for the ME-ICA organization.
rougier/scientific-visualization-book
An open access book on scientific visualization using python and matplotlib
keeppythonweird/catinabox
Intro to Testing and Test Automation in Python
Remi-Gau/online_neuroimaging_resources
a laundry list of resources for MRI, fMRI, EEG, MEG...
NeuromatchAcademy/course-content
NMA Computational Neuroscience course
DorienHuijser/MRIsharingguide
We developed a guide for researchers in the Netherlands who want to share brain MRI data to help them get started.