ME-ICA

Python-based tools for analyzing multi-echo fMRI data

Pinned Repositories

aroma
ICA-AROMA, as a Python package. A work in progress.
Language:Python7 6 3011
godec
Go Decomposition for fMRI data, in Python. A work in progress.
Language:Python2 4 40
mapca
A Python implementation of the moving average principal components analysis methods from GIFT
Language:Python6 5 238
me-ica
Core code for ME-ICA command line interface
Language:Python17 13 1524
multi-echo-data-analysis
Still a work in progress.
Language:TeX3 5 192
rica
Rica (Reports for ICA) provides an app to visualize ICA components and perform manual classification in an interactive way
Language:JavaScript7 2 372
tedana
TE-dependent analysis of multi-echo fMRI
Language:Python161 20 55795
tedana-comparison
Comparison of implementations of multi-echo fMRI denoising pipelines across datasets.
Language:Jupyter Notebook4 6 61
tedana-reliability-analysis
An analysis of the reliability of the tedana denoising pipeline on an example dataset
Language:Jupyter Notebook4 6 64
template-package
A template repository to use for new projects.
Language:Python0 8 30

ME-ICA's Repositories

ME-ICA/tedana
TE-dependent analysis of multi-echo fMRI
Language:Python161 20 55795
ME-ICA/me-ica
Core code for ME-ICA command line interface
Language:Python17 13 1524
ME-ICA/aroma
ICA-AROMA, as a Python package. A work in progress.
Language:Python7 6 3011
ME-ICA/rica
Rica (Reports for ICA) provides an app to visualize ICA components and perform manual classification in an interactive way
Language:JavaScript7 2 372
ME-ICA/mapca
A Python implementation of the moving average principal components analysis methods from GIFT
Language:Python6 5 238
ME-ICA/tedana-reliability-analysis
An analysis of the reliability of the tedana denoising pipeline on an example dataset
Language:Jupyter Notebook4 6 64
ME-ICA/multi-echo-data-analysis
Still a work in progress.
Language:TeX3 5 192
ME-ICA/ddmra
Code for running distance-dependent motion-related artifact analyses in Python
Language:Python2 3 62
ME-ICA/godec
Go Decomposition for fMRI data, in Python. A work in progress.
Language:Python2 4 40
ME-ICA/me-ica.github.io
Landing page for the ME-ICA organization.
Language:HTML2 6 12
ME-ICA/ohbm-2021-multiecho
Language:Jupyter Notebook2 5 2
ME-ICA/ohbm-2022-multiecho
2 3 1
ME-ICA/fmripost-tedana
A BIDS App for the tedana workflow
Language:Python1 4 8
ME-ICA/ohbm-2024-multiecho
Multi-echo related content at OHBM 2024
11
ME-ICA/open-multi-echo-data
Open multi-echo datasets
Language:Shell1 3 49
ME-ICA/template-package
A template repository to use for new projects.
Language:Python0 8 30
ME-ICA/ds002278
0 0
ME-ICA/ds003192
ME-ICA/ds003592
OpenNeuro dataset available at https://openneuro.org/datasets/ds003592
ME-ICA/ds003643
OpenNeuro dataset - Le Petit Prince: A multilingual fMRI corpus using ecological stimuli
Language:Shell0 0
ME-ICA/ds003643-bidsification
Code for reorganizing and preprocessing OpenNeuro dataset ds003643.
Language:Shell3 0
ME-ICA/ds003823
OpenNeuro dataset available at https://openneuro.org/datasets/ds003823
ME-ICA/ds004627
OpenNeuro dataset - Characterization and Treatment of Adolescent Depression (CAT-D)
0 0
ME-ICA/ds004662
OpenNeuro dataset - Denoising task-correlated head motion from motor-task fMRI data with multi-echo ICA
0 0
ME-ICA/ds004787
OpenNeuro dataset - NIMH METeR (Multi-Echo Test-Retest)
0 0
ME-ICA/ds004935
OpenNeuro dataset - The NIMH Intramural Multivariate Assessment of Inhibitory Control in Youth: Links with Psychopathology and Brain Function Dataset
ME-ICA/ds005085
OpenNeuro dataset - Sequence pilot: multiecho and multiband fMRI
0 0
ME-ICA/ds005118
OpenNeuro dataset - Weill Cornell Medicine Multi-echo (WCM-ME) Dataset
0 0
ME-ICA/newsletters
Newsletters to the community.
Language:HTML4 11
ME-ICA/ohbm-2023-multiecho
Multi-echo related content at OHBM 2023
Language:Jupyter Notebook3 1