Pinned Repositories
bamShrink
Filter for BAM-files
graphtyper
Population-scale genotyping using pangenome graphs
graphtyper-pipelines
Recommended Graphtyper pipelines
gyper
A graph-based genotyper for aligned DNA sequencing data
deluge-slack-bot
A slack bot that can interact with deluge
gyper
A graph-based genotyper for aligned DNA sequencing data
paw
Header-only C++11 libraries
stations
C++11 threadpool library
streamlink
CLI for extracting streams from various websites to a video player of your choosing
ThordurThjarki
A discord bot
hannespetur's Repositories
hannespetur/gyper
A graph-based genotyper for aligned DNA sequencing data
hannespetur/stations
C++11 threadpool library
hannespetur/ThordurThjarki
A discord bot
hannespetur/libStatGen
Useful set of classes for creating statistical genetic programs.
hannespetur/adapterremoval
AdapterRemoval v2
hannespetur/args
A simple header-only C++ argument parser library. Supposed to be flexible and powerful, and attempts to be compatible with the functionality of the Python standard argparse library (though not necessarily the API).
hannespetur/bioconda-recipes
Conda recipes for the bioconda channel.
hannespetur/boost-header-only
hannespetur/dipcall
Reference-based variant calling pipeline for a pair of phased haplotype assemblies
hannespetur/fastahack
utilities for indexing and sequence extraction from FASTA files
hannespetur/free.simd
hannespetur/gasvaktin
Automated price comparer for petrol stations in Iceland.
hannespetur/graphtyper-1
Population-scale genotyping using pangenome graphs
hannespetur/gyper_extras
hannespetur/hi-thesis.cls
Helga Ingimundardottir's PhD Thesis in Computational Engineering : Adaptive Learning Intelligent Composite rulEs
hannespetur/htslib
C library for high-throughput sequencing data formats
hannespetur/iambihow
hannespetur/libsimdpp
Portable header-only zero-overhead C++ low level SIMD library
hannespetur/livestreamer
Command-line utility that extracts streams from various services and pipes them into a video player of choice.
hannespetur/paw
Header-only C++11 libraries
hannespetur/popvcf-1
Lossless VCF compression
hannespetur/seqan
hannespetur/SeqAnHTS
hannespetur/smithwaterman
smith-waterman-gotoh alignment algorithm
hannespetur/streamlink
CLI for extracting streams from various websites to a video player of your choosing
hannespetur/SViper
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
hannespetur/tabixpp
C++ wrapper to tabix indexer
hannespetur/vcf_uncompressed_sample_names
hannespetur/vcflib
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
hannespetur/loka-ord
Libre database for icelandic words.