Pinned Repositories
CaliMRCT
Calibration Weighting Estimation of Treatment Effect Heterogeneity for MRCTs
ClusterDE
A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping
findPC
Automatic selection of number of principal components
Lamian
MUSTARD
Trajectory-guided dimension reduction for multi-sample single-cell RNA-seq data
PreTSA
Computationally efficient modeling of temporal and spatial gene expression patterns
scDesign3
scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
nnSVG
nnSVG: scalable method to identify spatially variable genes (SVGs) in spatially-resolved transcriptomics data
multinichenetr
MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
SPARK-X-Analysis
haotian-zhuang's Repositories
haotian-zhuang/findPC
Automatic selection of number of principal components
haotian-zhuang/CaliMRCT
Calibration Weighting Estimation of Treatment Effect Heterogeneity for MRCTs
haotian-zhuang/ClusterDE
A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping
haotian-zhuang/Lamian
haotian-zhuang/MUSTARD
Trajectory-guided dimension reduction for multi-sample single-cell RNA-seq data
haotian-zhuang/PreTSA
Computationally efficient modeling of temporal and spatial gene expression patterns
haotian-zhuang/scDesign3
scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics