heche-psb
PhD student of Bioinformatics & Evolutionary Genomics, Department of Plant Systems Biology, VIB, Gent, Belgium
Ghent Unversity
Pinned Repositories
Agora
Algorithm For Gene Order Reconstruction in Ancestors
Angiosperm_WGDs
This is the repository for the code of different analysis involved in our manuscript.
angst
Analyzer of Gene and Species Trees
bioconda-recipes
Conda recipes for the bioconda channel.
cognate
fossiler
Python package and CLI for finding available fossils
heche-psb.github.io
ksrates
ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
learn2cherrypick
wgd
wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication
heche-psb's Repositories
heche-psb/wgd
wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication
heche-psb/Agora
Algorithm For Gene Order Reconstruction in Ancestors
heche-psb/Angiosperm_WGDs
This is the repository for the code of different analysis involved in our manuscript.
heche-psb/angst
Analyzer of Gene and Species Trees
heche-psb/bioconda-recipes
Conda recipes for the bioconda channel.
heche-psb/cognate
heche-psb/fossiler
Python package and CLI for finding available fossils
heche-psb/heche-psb.github.io
heche-psb/ksrates
ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
heche-psb/learn2cherrypick
heche-psb/Machine-Learning-Course-2days
heche-psb/ML-course-VIB-2021
heche-psb/SubPhaser
Phase and visualize subgenomes of an allopolyploid or hybrid based on the repetitive kmers.
heche-psb/transcriptome_WGD_project
heche-psb/wgdtree
heche-psb/Whale.jl
Amalgamated likelihood estimation with a DL + WGD model
heche-psb/whaleprep
Nextflow pipeline for preparatory analyses for Whale
heche-psb/ModelRevelator
heche-psb/treespace
heche-psb/wgd-v2-docs