Pinned Repositories
appstore
The HeLx Appstore is the primary user experience component of the HeLx data science platform.
biobert_embedding
Token and Sentence level embeddings from BioBERT model
blackbalsam
COVID-19 Analytics with a Jupyter, AI&ML, Visualization, Spark, Alluxio, Minio, Kubernetes Stack
devops
docker-guacamole
Forked from oznu/docker-guacamole which is a self-contained guacamole docker container for x64 and ARM that allows users to remotely connect over SSH, RDP or VNC using HTML5. Our fork adds the vncserver and desktop so you can just start one docker and provide remote access to EC2 (for example) instances.
dug
Semantic Search
dug-search-client
helx-ui
A new UI for the helxplatform.
translator-devops
Repository for deployment artifacts for several translator tools.
tycho
Cloud native compiler, executor, API.
helxplatform's Repositories
helxplatform/eduhelx-file-api-chart
A helm chart to deploy eduhelx-file-api
helxplatform/app-support-prototype
A place to explore how we might support "apps" in Dockstore. These are long-running, interactive web services rather than batch workflows.
helxplatform/helx-docs
This repository contains sphinx-related HeLx documentation artifacts.
helxplatform/imagepullsecret-patcher
A simple Kubernetes client-go application that creates and patches imagePullSecrets to service accounts in all Kubernetes namespaces to allow cluster-wide authenticated access to private container registry.
helxplatform/kube-imagepuller
Pull container images to your nodes so that they are already present when containers are launched
helxplatform/gitops-dev
helxplatform/cmaq-docker
Community Multiscale Air Quality Modeling System (CMAQ) docker image
helxplatform/heal_translator_queries
helxplatform/search-ui
helxplatform/locust_scripts
helxplatform/pod-reaper
HeLx pod reaper
helxplatform/dug-dense-vectors
helxplatform/biobert_embedding
Token and Sentence level embeddings from BioBERT model
helxplatform/build-init
An init container supporting creating a well populated build environment
helxplatform/hubhub-ui
helxplatform/heal-sparc-converter
helxplatform/heal-phenx-kgx-convertor
Converts Phenx dataset to kgx format for graph loading
helxplatform/kubernetes-image-puller
Kubernetes Image Puller is used for caching images on a cluster. It creates a DaemonSet downloading and running the relevant container images on each node.
helxplatform/scout
Multiscale hyperdimensional phentypic analysis of organoids
helxplatform/jupyter-astronomy
Jupyter datascience notebook for astronomy
helxplatform/hubhub
A service to help coordinate teh hubs
helxplatform/Grokking-the-Coding-Interview-Patterns-for-Coding-Questions
Common Tech Interview Patterns
helxplatform/hubhub-chart
Helm chart for hubhub
helxplatform/blackbalsam
COVID-19 Analytics with a Jupyter, AI&ML, Visualization, Spark, Alluxio, Minio, Kubernetes Stack
helxplatform/lightcurve
Evryscope lightcurve data server
helxplatform/js9-fileviewer
js9 FITS format file viewer
helxplatform/tranql-chart
helxplatform/cloudtop-imagej-napari
A docker file based on CloudTop that includes ImageJ and Napari
helxplatform/tycho-api-chart
Helm chart for the Tycho API application
helxplatform/heal-data-munger
This repository holds scripts for munging of metadata from HEAL studies into a usable format for Dug