canopy2

Metagenomics Canopy Clustering Implementation.

Faster and more memory efficient implementation of the canopy clustering algorithm (doi:10.1038/nbt.2939).

Quickstart

git clone https://github.com/hildebra/canopy2.git
cd canopy2
make
./cc.bin -v

License

GPL-2.0: Please see License.txt

Author

This reimplementation is based on the original code by Piotr Dworzynski, and has since been improved (memory efficiency, speed, additional functionality) and maintained by Falk Hildebrand.