histonemark
Postdoctoral researcher at @acardona Evolution of nervous systems, Electron microscopes, Genomics, Data analysis
https://www2.mrc-lmb.cam.ac.uk/Cambridge (United Kingdom)
Pinned Repositories
.emacs.d
.emacs.d-1
🎉 Personal GNU Emacs configuration
awesome-em-datasets
awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
BBB
Bioinformatics for Benched Biologists
BioinformaticAlgorithms
Brainseq_code
catalysis
Python tools for interacting with CATMAID
course-content
Summer course content for Neuromatch Academy
DL-MBL-2022
Exercise repository for the "Deep Learning for Microscopy Image Analysis" course at the MBL.
histonemark's Repositories
histonemark/.emacs.d
histonemark/.emacs.d-1
🎉 Personal GNU Emacs configuration
histonemark/awesome-em-datasets
histonemark/awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
histonemark/BBB
Bioinformatics for Benched Biologists
histonemark/BioinformaticAlgorithms
histonemark/Brainseq_code
histonemark/catalysis
Python tools for interacting with CATMAID
histonemark/course-content
Summer course content for Neuromatch Academy
histonemark/DL-MBL-2022
Exercise repository for the "Deep Learning for Microscopy Image Analysis" course at the MBL.
histonemark/fibrem
histonemark/Fiji.app_video
histonemark/fourcline
histonemark/genomics_scripts
histonemark/hicline
histonemark/histonemark
histonemark/hpipline
histonemark/org-ref
org-mode modules for citations, cross-references, bibliographies in org-mode and useful bibtex tools to go with it.
histonemark/Palantir
Single cell trajectory detection
histonemark/phD-rscripts
histonemark/pycrumbs
Bits and bytes of Python from the Internet
histonemark/rcatmaid
R package providing API access to the CATMAID web image annotation tool
histonemark/resume
histonemark/retreteando
(Really simple) Orgmode demostration in a Lab retreat
histonemark/scipy_tutorial
histonemark/scripts
A collection of scripts related to neural circuit analysis and image processing for python, Fiji, TrakEM2, CATMAID, and others.
histonemark/scRNA-seq_online
histonemark/Second-Brain
A curated list of awesome Public Zettelkastens 🗄️ / Second Brains 🧠 / Digital Gardens 🌱
histonemark/stat-learning
Notes and exercise attempts for "An Introduction to Statistical Learning"
histonemark/The_C_Prog_lang