Pinned Repositories
annotation_comparison
R Shiny app for comparison of annotations (e.g., cell type assignments)
brain_data_standards_kb
A repository for the Brain Data Standards knowledge graph
brain_data_standards_ontologies
A repository for co-ordinating work on ontologies for the Brain Data Standards Project
brain_data_standards_solr
A repository for the Brain Data Standards Solr instance
cell-type-annotation-tools
hkir-dev's Repositories
hkir-dev/annotation_comparison
R Shiny app for comparison of annotations (e.g., cell type assignments)
hkir-dev/brain_data_standards_kb
A repository for the Brain Data Standards knowledge graph
hkir-dev/brain_data_standards_ontologies
A repository for co-ordinating work on ontologies for the Brain Data Standards Project
hkir-dev/brain_data_standards_solr
A repository for the Brain Data Standards Solr instance
hkir-dev/cell-type-annotation-tools
hkir-dev/CxG_test
OBASK CxG Pandasaurus test
hkir-dev/demo
OntoDev Demo
hkir-dev/experimental_notebooks
Misc notebooks for experiments
hkir-dev/h5ad-annotation
hkir-dev/hashing_algorithms_python
hkir-dev/hashing_algorithms_r
hkir-dev/human_m1
hkir-dev/json_schema_merge
hkir-dev/mouse_brain_atlas_ontology_legacy
Ontological representation of the Allen Mouse Brain Atlas
hkir-dev/mouse_whole_brain_taxonomy
hkir-dev/mvn-repo
Maven repository to host 3rd party libraries used by the Protege project that aren't in Maven Central.
hkir-dev/nanobot
hkir-dev/nanobot.rs
hkir-dev/nhp_basal_ganglia_taxonomy_v2
hkir-dev/owlapi
OWL API main repository
hkir-dev/protege
Protege Desktop
hkir-dev/protege-distribution
Build files for the protege distribution that includes 3rd party plugins
hkir-dev/purl.brain-bican.org
A system for managing BICAN PURLs
hkir-dev/purl.obolibrary.org
A system for managing OBO PURLs
hkir-dev/Pypher
Python Cypher Querybuilder
hkir-dev/robot
ROBOT is an OBO Tool
hkir-dev/siletti_hacking
hkir-dev/sprocket
hkir-dev/whbo_pipeline
hkir-dev/wmb-pipeline-config
Brain data standards ontologies building pipeline configuration